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Journal Articles

Di Lorenzo, E. and N. J. Mantua, Multi-year persistence of 2014/15 North Pacific marine heatwave. Nature Climate Change, 6, 1042-1048, 2016. DOI 10.1038/nclimate3082. CCE LTER Contribution #0374; AR2016.
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Newman, M., M. A. Alexander, T. R. Ault, K. M. Cobb, C. Deser, E. Di Lorenzo, N. J. Mantua, A. J. Miller, S. Minobe, H. Nakamura, N. Schneider, D. J. Vimont, A. S. Phillips, J. D. Scott and C. A. Smith, The Pacific Decadal Oscillation, revisited. Journal of Climate, 29, 4399-4427, 2016. DOI 10.1175/JCLI-D-15-0508.1. CCE LTER Contribution #0372; AR2016.
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Chenillat, F., P.J.S. Franks, and V. Combes, Biogeochemical properties of eddies in the California Current System. Geophysical Research Letters, 43, 5812–5820, 2016. DOI 10.1002/2016GL068945. CCE LTER Contribution #0371; AR2016.
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Martínez-Fuentes, L.M, G. Gaxiola-Castro, E. Gómez-Ocampo, M. Kahru, Effects of interannual events (1997-2012) on the hydrography and phytoplankton biomass of Sebastián Vizcaíno Bay. Ciencias Marinas, 42 (2), 81-97, 2016. DOI 10.7773/cm.v42i2.2626. CCE LTER Contribution #0370; AR2016.
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Kahru, M., R.M. Kudela, C.R. Anderson, and B.G. Mitchell, Optimized merger of ocean chlorophyll algorithms. IEEE Geoscience and Remote Sensing Letters, 12 (11), 2282-2285, 2015. DOI 10.1109/LGRS.2015.2470250.. CCE LTER Contribution #0369; AR2016.
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Whitlock, R.E., E.L. Hazen, A. Walli, C. Farwell, S.J. Bograd, D.G. Foley, M. Castleton, and B.A. Block, Direct quantification of energy intake in an apex marine predator suggests physiology is a key driver of migrations. Science Advances, 1:e1400270, 2015. CCE LTER Contribution #0368; AR2016.
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Rykaczewski, R.R., J.P. Dunne, W.J. Sydeman, M. Garcia-Reyes, B.A. Black, and S.J. Bograd, Poleward displacement of coastal upwelling-favorable winds in the ocean's eastern boundary currents through the 21st century. Geophysical Research Letters, 42, 6424-6431, 2015. DOI 10.1002/2015GL064694. CCE LTER Contribution #0366; AR2016.
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Leising, A.W., I.D. Schroeder, S.J. Bograd, J. Abell, R. Durazo, G. Gaxiola-Castro, E.P. Bjorkstedt, J. Field, K. Sakuma, R.R. Robertson, R. Goericke, W.P. Peterson, R.D. Brodeur, C. Barcelo, T.D. Auth, E.A. Daly, R.M. Suryan, A.J. Gladics, J.M. Porquez, S. McClatchie, E.D. Weber, W. Watson, J.A. Santora, W.J. Sydeman, S.R. Melin, F.P. Chavez, R.T. Golightly, S.R. Schneider, J. Fisher, C. Morgan, R. Bradley, P. Warzybok, The state of the California Current, 2014-15: Impacts of the warm-water "blob". CalCOFI Reports, 56, 31-68, 2015. CCE LTER Contribution #0365; AR2016.
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Jacox, M.G., E.L. Hazen, K.D. Zaba, D.L. Rudnick, C.A. Edwards, A.M. Moore, and S.J. Bograd, Impacts of the 2015-2016 El Niño on the California Current System: early assessment and comparison to past events. Geophysical Research Letters, 43 (13), 7072–7080, 2016. DOI 10.1002/2016GL069716. CCE LTER Contribution #0364; AR2016.
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Jacox, M.G., E.L. Hazen, and S.J. Bograd, Optimal environmental conditions and anomalous ecosystem responses: constraining bottom-up controls of phytoplankton biomass in the California Current System. Nature Scientific Reports, 6:27612, 2016. DOI 10.1038/srep27612. CCE LTER Contribution #0363; AR2016.
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Garcia-Reyes, M., W.J. Sydeman, D.S. Schoeman, R.R. Rykaczewski, B.A. Black, A.J. Smit, and S.J. Bograd, Under pressure: Climate change, upwelling and eastern boundary upwelling ecosystems. Frontiers in Marine Science, 2:109, 2015. DOI 10.3389/fmars.2015.00109. CCE LTER Contribution #0362; AR2016.
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Dorman, J.G., W.J. Sydeman, S.J. Bograd, and T.M. Powell, An individual-based model of Euphausia pacifica in the California Current. Progress in Oceanography, 138, 504-520, 2015. DOI 10.1016/j.pocean.2015.02.006. CCE LTER Contribution #0361; AR2016.
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Harada, A.E., Lindgren E.A., Hermsmeier M.C., Rogowski P.A., Terrill E., and Burton R.S., Monitoring spawning activity in a Southern California marine protected area using molecular identification of fish eggs. PLoS One, 10 (8), e0134647, 2015. DOI 10.1371/journal.pone.0134647. CCE LTER Contribution #0360; AR2016.
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Smith, K.L., C.L. Huffard, A.D. Sherman and H.A. Ruhl, Decadal change in sediment community oxygen consumption in the abyssal Northeast Pacific. Aquat. Geochem., 22 (5), 401-417, 2016. DOI 10.1007/s10498-016-9293-3. CCE LTER Contribution #0359; AR2016.
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Bundy, R.M., Carter, M., Jiang, M. and Barbeau, K.A., Iron-binding ligands in the southern California Current System: mechanistic studies. Front. Mar. Sci., 3:27, 2016. DOI 10.3389/fmars.2016.00027. CCE LTER Contribution #0358; AR2016.
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Stukel, M. R., Aluwihare, L. I., Barbeau, K. A., Chekalyuk, A. M., Goericke, R., Miller, A. J., Ohman, M. D., Ruacho, A., Song, H., Stephens, B., and Landry, M. R., Mesoscale ocean fronts enhance carbon export due to gravitational sinking and subduction. PNAS, 2017 (online). DOI 10.1073/pnas.1609435114. CCE LTER Contribution #0357; AR2016.
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Szoboszlai, A.I., J.A. Thayer, S.A. Wood, W.J. Sydeman, and L.E. Koehn, Forage species in predator diets: Synthesis of data from the California Current. Ecological Informatics, 29, 45-56, 2015. DOI 10.1016/j.ecoinf.2015.07.003. CCE LTER Contribution #0355; AR2016.
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Dunlop K.M, L.A. Kuhnz, H.A. Ruhl, C.L. Huffard, D.W Caress, R.G. Henthorn, B.W. Hobson, P. McGill, K.L. Smith, Jr, An evaluation of deep-sea benthic megafauna length measurements obtained with laser and stereo camera methods. Deep-Sea Research I, 96, 38-48, 2015. DOI 10.1016/j.dsr.2014.11.003. CCE LTER Contribution #0354; AR2016.
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Laguionie‑Marchais, C., L.A. Kuhnz, C.L. Huffard, H.A. Ruhl, and K.L. Smith Jr., Spatial and temporal variation in sponge spicule patches at Station M, northeast Pacific. Marine Biology, 162, 617-624, 2015. DOI 10.1007/s00227-014-2609-1. CCE LTER Contribution #0353; AR2016.
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Laguionie-Marchais, C., D.S.M. Billett, G.L.D. Paterson, H.A. Ruhl, E.H. Soto, K.L. Smith Jr., and S. Thatje, Inter-annual dynamics of abyssal polychaete communities in the North East Pacific and North East Atlantic—A family-level study. Deep Sea Research I, 75, 175-186, 2013. DOI 10.1016/j.dsr.2012.12.007. CCE LTER Contribution #0352; AR2016.
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Jeffreys, R.M., C. Burke, A.J. Jamieson, B.E. Narayanaswamy, H.A. Ruhl, K.L. Smith Jr., and U. Witte, Feeding Preferences of Abyssal Macrofauna Inferred from In Situ Pulse Chase Experiments. PLoS ONE, 8 (11), e80510, 2013. DOI 10.1371/journal.pone.0080510. CCE LTER Contribution #0351; AR2016.
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Ruhl, H.A., B.J. Bett, S.J.M. Hughes, C.H.S. Alt, E.J. Ross, R.S. Lampitt, C.A. Pebody, K.L. Smith, and D.S.M. Billett, Links between deep-sea respiration and community dynamics. Ecology, 95 (6), 1651-1662, 2014. CCE LTER Contribution #0350; AR2016.
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Kuhnz, L.A., H. A. Ruhl, C.L. Huffard, and K. L. Smith Jr., Rapid changes and long-term cycles in the benthic megafaunal community observed over 24 years in the abyssal northeast Pacific. Progress in Oceanography, 124, 1-11, 2014. DOI 10.1016/j.pocean.2014.04.007. CCE LTER Contribution #0349; AR2016.
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Lindegren, M., Checkley Jr., D.M., Ohman, M.D., Koslow, J.A., and Goericke, R., Resilience and stability of a pelagic marine ecosystem. Proceedings of the Royal Society B, 283, 20151931, 2016. DOI 10.1098/rspb.2015.1931. CCE LTER Contribution #0348; AR2016.
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Asch, R. G., Climate change and decadal shifts in the phenology of larval fishes in the California Current ecosystem. Proceedings of the National Academy of Sciences of the United States of America, 112, E4065-E4074, 2015. DOI 10.1073/pnas.1421946112. CCE LTER Contribution #0347; AR2016.
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Ohman, M. D. and J. -B. Romagnan, Nonlinear effects of body size and optical attenuation on Diel Vertical Migration by zooplankton. Limnology and Oceanography, 61, 765-770, 2016. DOI 10.1002/lno.10251. CCE LTER Contribution #0346; AR2016.
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Santora, J. A., and W. J. Sydeman, Persistence of hotspots and variability of seabird species richness and abundance in the southern California Current. Ecosphere, 6 (11), 214, 2015. CCE LTER Contribution #0345; AR2016.
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Stukel, M. R., M. Kahru, C. R. Benitez-Nelson, M. Decima, R. Goericke, M. R. Landry, and M. D. Ohman, Using Lagrangian-based process studies to test satellite algorithms of vertical carbon flux in the eastern North Pacific Ocean. J. Geophys. Res. Oceans, 120, 7208–7222, 2015. DOI 10.1002/2015JC011264. CCE LTER Contribution #0343; AR2016.
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de Verneil, A., and P. J. S. Franks, A pseudo-Lagrangian method for remapping ocean biogeochemical tracer data: Calculation of net Chl-a growth rates. J. Geophys. Res. Oceans, 120, 4962-4979, 2015. DOI 10.1002/2015JC010898. CCE LTER Contribution #0342; AR2016.
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Chenillat, F., B. Blanke, N. Grima, P.J.S. Franks, X. Capet and P. Rivière, Quantifying tracer dynamics in moving fluids: a combined Eulerian-Lagrangian approach. Front. Environ. Sci., 3, 43, 2015. DOI 10.3389/fenvs.2015.00043. CCE LTER Contribution #0340; AR2016.
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Chenillat, F., P.J.S. Franks, P. Rivière, X. Capet, N. Grima and B. Blanke, Plankton dynamics in a cyclonic eddy in the Southern California Current System. Journal of Geophysical Research: Oceans, 120, 5566-5588, 2015. DOI 10.1002/2015JC010826. CCE LTER Contribution #0339; AR2016.
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Lugomela, C., T.J. Lyimo, L.A. Namkinga, S. Moyo, R. Goericke and S. Sjöling, Co-variation of Cholera with Climatic and Environmental Parameters in Coastal Regions of Tanzania. Western Indian Ocean J. Mar. Sci., 13 (1), 93-105, 2015. CCE LTER Contribution #0337; AR2016.
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Netburn, A.N. and J.A. Koslow, Dissolved oxygen as a constraint on daytime deep scattering layer depth in the southern California current ecosystem. Deep-Sea Research I, 104, 149-158, 2015. DOI 10.1016/j.dsr.2015.06.006. CCE LTER Contribution #0336; AR2016.
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Di Lorenzo, E., Climate science: The future of coastal ocean upwelling. Nature, 518 (7539), 310-311, 2015. DOI 10.1038/518310a. CCE LTER Contribution #0334; AR2015.
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Pozo Buil, M. and E. Di Lorenzo, Decadal changes in Gulf of Alaska upwelling source waters. Geophysical Research Letters, 42 (5), 1488-1495, 2015. DOI 10.1002/2015GL063191. CCE LTER Contribution #0333; AR2015.
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Dupont, C.L., J.P. McCrow, R. Valas, A. Moustafa, N. Walworth, U. Goodenough, R. Roth, S.L. Hogle, J. Bai, Z.I. Johnson, E. Mann, B. Palenik, K.A. Barbeau, J. Craig Venter and A.E. Allen, Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities. The ISME Journal, 9, 1076-1092, 2015. DOI 10.1038/ismej.2014.198. CCE LTER Contribution #0332; AR2015.
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Bundy, R. M., H.A.N. Abdulla, P.G. Hatcher, D.V. Biller, K.N. Buck and K.A. Barbeau, Iron-binding ligands and humic substances in the San Francisco Bay estuary and estuarine-influenced shelf regions of coastal California. Marine Chemistry, 173, 183-194, 2015. DOI 10.1016/j.marchem.2014.11.005. CCE LTER Contribution #0331; AR2015.
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Brzezinski, M.A., J.W. Krause, R.M. Bundy, K.A. Barbeau, P.J.S. Franks, R. Goericke, M.R. Landry and M.R. Stukel, Enhanced silica ballasting from iron stress sustains carbon export in a frontal zone within the California Current. Journal of Geophysical Research - Oceans, 120, 1-16, 2015. DOI 10.1002/2015JC010829. CCE LTER Contribution #0330; AR2016.
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Krause, J.W., M.A. Brzezinski, R. Goericke, M.R. Landry, M.D. Ohman, M.R. Stukel and A.G. Taylor, Variability in diatom contributions to biomass, organic matter production and export across a frontal gradient in the California Current Ecosystem. Journal of Geophysical Research - Oceans, 120 (2), 1032-1047, 2015. DOI 10.1002/2014JC010472. CCE LTER Contribution #0329; AR2015.
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Edwards, C.A., A.M. Moore, I. Hoteit and B.D. Cornuelle, Regional ocean data assimilation. Annu. Rev. Mar. Sci., 7, 6.1-6.22, 2015. DOI 10.1146/annurev-marine-010814-015821. CCE LTER Contribution #0328; AR2015.
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Raghukumar, K., C. A. Edwards, N. L. Goebel, G. Broquet, M. Veneziani, A. M. Moore, J. P. Zehr, Impact of assimilating physical oceanographic data on modeled ecosystem dynamics in the California Current System. Progress in Oceanography, 138, 546-558, 2015. DOI 10.1016/j.pocean.2015.01.004. CCE LTER Contribution #0327; AR2015.
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Dorman, J.G., W.J. Sydeman, M. Garcia-Reyes, R.A. Zeno, and J.A. Santora, Modeling krill aggregations in the central-northern California Current. Mar. Ecol. Prog. Series, 528, 87-99, 2015. DOI 10.3354/meps11253. CCE LTER Contribution #0326; AR2015.
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Jackson, G.A., D.M. Checkley Jr and M. Dagg 99: 75-86, doi: 10.1016/j.dsr.2015.02.001, Settling of particles in the upper 100m of the ocean detected with autonomous profiling floats off California. Deep Sea Research I, 99, 75-86, 2015. DOI http://dx.doi.org/10.1016/j.dsr.2015.02.001. CCE LTER Contribution #0325; AR2015.
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Jacox, M., S.J. Bograd, E.L. Hazen, J. Fiechter, Sensitivity of the California Current nutrient supply to wind, heat, and remote ocean forcing. Geophys. Res. Lett., 42, 5950-5957, 2015. DOI 10.1002/2015GL065147. CCE LTER Contribution #0324; AR2016.
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Sydeman, W.J., M. Garcia-Reyes, D. Schoeman, R. Rykaczewski, S.A. Thompson, B.A. Black, and S.J. Bograd, Climate change and wind intensification in coastal upwelling ecosystems. Science, 345 (6192), 77-80, 2014. DOI 10.1126/science.1251635. CCE LTER Contribution #0323; AR2015.
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Schroeder, I.D., J.A. Santora, A. Moore, C. Edwards, J. Fiechter, E.L. Hazen, S.J. Bograd, J. Field, and B.K. Wells, Application of a data-assimilative regional ocean modeling system for assessing California Current System ocean conditions, krill, and juvenile rockfish interannual variability. Geophysical Research Letters, 41, 5942–5950, 2014. DOI 10.1002/2014GL061045. CCE LTER Contribution #0322; AR2015.
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Bograd, S.J., E.L. Hazen, E.A. Howell, and A.B. Hollowed, The fate of fisheries oceanography: Introduction to the special issue. Oceanography, 27 (4), 21-25, 2014. CCE LTER Contribution #0321; AR2015.
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Bakun, A., B. A. Black, S. J. Bograd, M. Garcia-Reyes, A. J. Miller, R. R. Rykaczewski and W. J. Sydeman, Anticipated effects of climate change on coastal upwelling ecosystems. Current Climate Change Reports, 1, 85-93, 2015. DOI 10.1007/s40641-015-0008-4. CCE LTER Contribution #0320; AR2015.
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Powell, J.R. and M.D. Ohman, Changes in zooplankton habitat, behavior, and acoustic scattering characteristics across glider-resolved fronts in the Southern California Current System. Progress in Oceanography, 134, 77-92, 2015. DOI doi:10.1016/j.pocean.2014.12.011. CCE LTER Contribution #0317; AR2015.
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Bednarsek, N. and M.D. Ohman, Changes in pteropod distributions and shell dissolution across a frontal system in the California Current System. Mar. Ecol. Prog. Series, 523, 93-103, 2015. DOI 10.3354/meps11199. CCE LTER Contribution #0316; AR2015.
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Pasulka, A.L., T.J. Samo, and M.R. Landry, Grazer and viral impacts on microbial growth and mortality in the southern California Current Ecosystem. Journal of Plankton Research, 37 (2), 1-17, 2015. DOI 10.1093/plankt/fbv011. CCE LTER Contribution #0315; AR2015.
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Davison, P., J.A. Koslow and R.J. Kloser, Acoustic biomass estimation of mesopelagic fish: backscattering from individuals, populations, and communities. ICES Journal of Marine Science, 72 (5), 1413–1424, 2015. DOI 10.1093/icesjms/fsv023. CCE LTER Contribution #0314; AR2015.
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Goericke, R. and M.D. Ohman, Introduction to CCE-LTER: Responses of the California Current Ecosystem to climate forcing. Deep Sea Research II, 112, 1-5, 2015. DOI 10.1016/j.dsr2.2014.12.001. CCE LTER Contribution #0313; AR2015.
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Kang, Y. -S. and M. D. Ohman, Comparison of Long-Term Trends of Zooplankton from Two Marine Ecosystems Across the North Pacific: Northeastern Asian Marginal Sea and Southern California Current System. CalCOFI Reports, 55, 169-182, 2014. CCE LTER Contribution #0312; AR2015.
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Koslow, J.A. and J. Couture, Follow the fish. Nature, 502, 163-164, 2013. CCE LTER Contribution #0311.
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Koslow, J. A. and J. Couture, Pacific Ocean observation programs: Gaps in ecological time series. Marine Policy, 51, 408-414, 2015. DOI http://dx.doi.org/10.1016/j.marpol.2014.09.003. CCE LTER Contribution #0310; AR2015.
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Bresnahan, P.J., Martz T.R., Takeshita Y., Johnson K.S., and LaShomb M., Best practices for autonomous measurement of seawater pH with the Honeywell Durafet. Methods in Oceanography, 9, 44-60, 2014. DOI 10.1016/j.mio.2014.08.003. CCE LTER Contribution #0309; AR2015.
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Martz, T., U. Send, M.D. Ohman, Y. Takeshita, P. Bresnahan, H.-J. Kim, and S.H. Nam, Dynamic variability of biogeochemical ratios in the Southern California Current System. Geophysical Research Letters, 41 (7), 2496-2501, 2014. DOI 10.1002/2014gl059332. CCE LTER Contribution #0307; AR2015.
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Kahru, M., R.M. Kudela, C.R. Anderson, M. Manzano-Sarabia, B.G. Mitchell, Evaluation of satellite retrievals of ocean chlorophyll-a in the California Current. Remote Sensing, 6, 8524-8540, 2014. DOI 10.3390/rs6098524. CCE LTER Contribution #0306; AR2015.
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Campbell, G. S., L. Thomas, K. Whitaker, A. B. Douglas, J. Calambokidis and J. A. Hildebrand, Inter-annual and seasonal trends in cetacean distribution, density and abundance in waters off southern California. Deep-Sea Research II, 112, 143-157, 2015. DOI 10.1016/j.dsr2.2014.10.008. CCE LTER Contribution #0304;AR2015.
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Goericke, R., S. J. Bograd and D. S. Grundle, Denitrification and flushing of the Santa Barbara Basin bottom waters. Deep-Sea Research II, 112, 53-60, 2015. DOI 10.1016/j.dsr2.2014.07.012. CCE LTER Contribution #0303; AR2015.
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Taniguchi, D.A.A., Franks, P.J.S., Poulin, F.J., Planktonic biomass size spectra: an emergent property of size-dependent physiological rates, food web dynamics, and nutrient regimes. Mar. Ecol. Prog. Series, 514, 13-33, 2014. DOI 10.3354/meps10968. CCE LTER Contribution #0302; AR2015.
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Wang, S., Lambert, W., Giang, S., Goericke, R., and Palenik, B., Microalgal assemblages in a poikilohaline pond. Journal of Phycology, 50 (2), 303-309, 2014. DOI 10.1111/jpy.12158. CCE LTER Contribution #0301; AR2014.
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Wells, B., I.D. Schroeder, J.A. Santora, E.L. Hazen, S.J. Bograd, E. Bjorkstedt, V.J. Loeb, S. McClatchie, E.D. Weber, W. Watson, A.R. Thompson, W. Peterson, R.D. Brodeur,, J. Harding, J. Field, K. Sakuma, S. Hayes, N. Mantua, W.J. Sydeman, M. Losekoot, S.A. Thompson, J. Largier, S.Y. Kim, F.P. Chavez, C. Barcelo, P. Warzybok,, R. Bradley, J. Jahncke, R. Goericke, G.S. Campbell, J.A. Hildebrand, S.R. Melin, R.L. DeLong, J. Gomez-Valdes, B. Lavaniegos, G. Gaxiola-Castro, R.T. Golightly,, and S.R. Schneider, N. Lo, R.M. Suryan, A.J. Gladics, C.A. Horton, J. Fisher, C. Morgan, J. Peterson, E.A. Daly, T.D. Auth, and J. Abell, State of the California Current 2012-13: No Such Thing as an “Average” Year. CalCOFI Reports, 54, 37-71, 2013. CCE LTER Contribution #0300.
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Di Lorenzo, E., D. Mountain, H.P. Batchelder, N.A. Bond, and E.E. Hofmann, Advances in marine ecosystem dynamics from US GLOBEC: the horizontal-advection bottom-up forcing paradigm. Oceanography, 26 (4), 22-33, 2013. DOI 10.5670/oceanog.2013.73. CCE LTER Contribution #0299.
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Subramanian, A. C., Miller, A. J., Cornuelle, B. D., Di Lorenzo, E., Weller, R. A., and Straneo, F., A data assimilative perspective of oceanic mesoscale eddy evolution during VOCALS-REx. Atmospheric Chemistry and Physics, 13 (6), 3329-3344, 2013. DOI 10.5194/acp-13-3329-2013. CCE LTER Contribution #0298.
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Freeman, L. A., Kleypas, J. A., and Miller, A. J., Coral Reef Habitat Response to Climate Change Scenarios. PLoS ONE, 8 (12), e82404, 2013. DOI 10.1371/journal.pone.0082404. CCE LTER Contribution #0297.
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Kahru, M., Jacox, M.G., Lee, Z, Kudela, R.M., Manzano-Sarabia, M., and Mitchell, B.G., Optimized multi-satellite merger of primary production estimates in the California Current using inherent optical properties. Journal of Marine Systems, 147, 94-102, 2015. DOI 10.1016/j.jmarsys.2014.06.003. CCE LTER Contribution #0296; AR2015.
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Lee, Z., Marra, J., Perry, M.J., and Kahru, M., Estimating oceanic primary productivity from ocean color remote sensing: A strategic assessment. Journal of Marine Systems, 149, 50-59, 2015. DOI 10.1016/j.jmarsys.2014.11.015. CCE LTER Contribution #0295; AR2015.
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Goebel, N.L., C.A. Edwards, M.J. Follows, and J.P. Zehr, Modeled diversity effects on microbial ecosystem functions of primary production, nutrient uptake, and remineralization. Ecology, 95 (1), 153-163, 2014. DOI http://dx.doi.org/10.1890/13-0421.1. CCE LTER Contribution #0294; AR2014.
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Smith, Jr., K.L. , H.A. Ruhl, M. Kahru, C.L. Huffard, A.D. Sherman, Deep ocean communities impacted by changing climate over 24 y in the abyssal northeast Pacific Ocean. Proceedings of the Natural Academy of Sciences, 110 (49), 19838-19841, 2013. DOI 10.1073/pnas.1315447110. CCE LTER Contribution #0293.
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Landry, M.R., On database biases and hypothesis testing with dilution experiments: Response to Comment by Latasa. Limnology and Oceanography, 59 (3), 1095-1096, 2014. DOI 10.4319/lo.2014.59.3.1095. CCE LTER Contribution #0291; AR2015.
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Freibott, A., L. Linacre and M.R. Landry, A slide preparation technique for light microscopy analysis of ciliates preserved in Acid Lugol’s fixative. Limnology and Oceanography: Methods, 12, 54-62, 2014. DOI 10.4319/lom.2014.12.54. CCE LTER Contribution #0290; AR2014.
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Bograd, S.J., M. Pozo Buil, E. Di Lorenzo, C.G. Castro, I. Schroeder, R. Goericke, C. Anderson, C. Benitez-Nelson, and F.A. Whitney, Changes in source waters to the Southern California Bight. Deep-Sea Research II, 112, 42-52, 2015. DOI 10.1016/j.dsr2.2014.04.009. CCE LTER Contribution #0289; AR2015.
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Davison, P., A. Lara-Lopez, J. A. Koslow, Mesopelagic fish biomass in the southern California current ecosystem. Deep-Sea Research II, 112, 129-142, 2015. DOI 10.1016/j.dsr2.2014.10.007. CCE LTER Contribution #0288; AR2015.
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Smith, Jr., K. L., A. D. Sherman, C. L. Huffard, P. R. McGill, R. Henthorn, S. Von Thun, H. A. Ruhl, M. Kahru, and M. D. Ohman, Large salp bloom export from the upper ocean and benthic community response in the abyssal northeast Pacific: Day to week resolution. Limnology and Oceanography, 59 (3), 745-757, 2014. DOI 10.4319/lo.2014.59.3.0745. CCE LTER Contribution #0287; AR2014.
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Di Lorenzo, E., V. Combes, J.E. Keister, P.T. Strub, A.C. Thomas, P.J.S. Franks, M.D. Ohman, J.C. Furtado, A. Bracco, S.J. Bograd, W.T. Peterson, F.B. Schwing, S. Chiba, B. Taguchi, S. Hormazabal, and C. Parada, Synthesis of Pacific Ocean Climate and Ecosystem Dynamics. Oceanography, 26 (4), 68-81, 2013. DOI 10.5670/oceanog.2013.76. CCE LTER Contribution #0286.
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Batchelder, H.P., K.L. Daly, C.S. Davis, R. Ji, M.D. Ohman, W.T. Peterson, and J.A. Runge, Climate Impacts on Zooplankton Population Dynamics in Coastal Marine Ecosystems. Oceanography, 26 (4), 34-51, 2013. DOI 10.5670/oceanog.2013.74. CCE LTER Contribution #0285.
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Miller, A.J., H. Song, and A.C. Subramanian, The physical oceanographic environment during the CCE-LTER Years: Changes in climate and concepts. Deep-Sea Research II, 112, 6-17, 2015. DOI 10.1016/j.dsr2.2014.01.003. CCE LTER Contribution #0284; AR2015.
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Chenillat F, Rivière P, Capet X, Franks P.J.S., and Blanke, B., California Coastal Upwelling Onset Variability: Cross-Shore and Bottom-Up Propagation in the Planktonic Ecosystem. PLoS ONE, 8 (5), e62281, 2013. DOI 10.1371/journal.pone.0062281. CCE LTER Contribution #0281.
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Sydeman, W.J., Thompson, S.A., and Kitaysky, A., Seabirds and climate change: roadmap for the future. Marine Ecology Progress Series, 454, 107-117, 2012. DOI 10.3354/meps09806. CCE LTER Contribution #0280.
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Chenillat, F., Rivière, P., Capet, X., Di Lorenzo, E., and Blanke, B., North Pacific Gyre Oscillation modulates seasonal timing and ecosystem functioning in the California Current upwelling system. Geophysical Research Letters, 39 (1), L01606, 2012. DOI 10.1029/2011GL049966. CCE LTER Contribution #0279.
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Koslow, J. A., L. Rogers-Bennett, D.J. Neilson, A time series of California spiny lobster (Panulirus interruptus) phyllosoma from 1951 to 2008 links abundance to warm oceanographic conditions in southern California. CalCOFI Reports, 53, 132-139, 2012. CCE LTER Contribution #0278.
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Goericke, R., E. Venrick, T. Koslow, W.J. Sydeman, F.B. Schwing, S.J. Bograd, W.T. Peterson, R. Emmett, J.R. Lara Lara, G. Gaxiola Castro, J.G. Valdez, K.D. Hyrenbach, R.W. Bradley, M.J. Weise, J.T. Harvey, C. Collins, and N.C.H. Lo, The State of the California Current, 2006-207: Regional and local processes dominate. CalCOFI Reports, 48, 33-66, 2007. CCE LTER Contribution #0277.
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Bjorkstedt, E.P., R. Goericke, S. McClatchie, E. Weber, W. Watson, N. Lo, W.T. Peterson, R. Brodeur, R.D. Brodeur, T. Auth, J. Fisher, C. Morgan, J. Peterson, J. Largier, S. Bograd, R. Durazo, G. Gaxiola-Castro, B. Lavaniegos, F.P. Chavez, C.A. Collins, B. Hannah, J. Field, K. Sakuma, W. Satterthwaite, M. O'Farrell, S. Hayes, J. Harding, W. Sydeman, S.A. Thompson, P. Warzybok, R. Bradley, J. Jahncke, R.T. Golightly, S.R. Schneider, R.M. Suryan, A.J. Gladics, C.A. Horton, S.Y. Kim, S.R. Melin, R.L. Delong, and J. Abell, State of the California Current 2011-2012: Ecosystems respond to local forcing as La Niña wavers and wanes. CalCOFI Reports, 53, 41-76, 2012. CCE LTER Contribution #0276.
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Roe, K. L., S. L. Hogle, and K. A. Barbeau, Utilization of heme as an iron source by marine Alphaproteobacteria in the Roseobacter clade. Applied and Environmental Microbiology, 79 (18), 5753-5762, 2013. DOI 10.1128/AEM.01562-13. CCE LTER Contribution #0273.
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Alin, S. R., Feely, R. A., Dickson, A. G., Hernández-Ayón, J. M., Juranek, L. W., Ohman, M. D., and Goericke, R., Robust empirical relationships for estimating the carbonate system in the southern California Current System and application to CalCOFI hydrographic cruise data (2005–2011). Journal of Geophysical Research: Oceans, 117 (C5), C05033, 2012. DOI 10.1029/2011JC007511. CCE LTER Contribution #0270.
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Goldstein, M. C., A. J. Titmus, and M. Ford, Scales of spatial heterogeneity of plastic marine debris in the northeast Pacific Ocean. PLOS ONE, 8 (11), e80020, 2013. DOI 10.1371/journal.pone.0080020. CCE LTER Contribution #0269.
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Goldstein, M.C. and D.S. Goodwin, Gooseneck barnacles (Lepas spp.) ingest microplastic debris in the North Pacific Subtropical Gyre. Peer J, 1, e184, 2013. DOI 10.7717/peerj.184. CCE LTER Contribution #0268.
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Goldstein, M.C, H.S. Carson, M. Eriksen, Relationship of diversity and habitat area in North Pacific plastic‑associated rafting communities. Marine Biology, 161 (6), 1441-1453, 2014. DOI 10.1007/s00227-014-2432-8. CCE LTER Contribution #0267; AR2015.
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Bundy, R.M., Biller, D.V., Buck, K.N., Bruland, K.W. and Barbeau, K.A., Distinct pools of dissolved iron-binding ligands in the surface and benthic boundary layer of the California Current. Limnology and Oceanography, 59 (3), 769-787, 2014. DOI 10.4319/lo.2014.59.3.0769. CCE LTER Contribution #0259; AR2014.
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Bjorkstedt, E.P., R. Goericke, S. McClatchie, E. Weber, W. Watson, N. Lo, B. Peterson, B. Emmett, J. Peterson, R. Durazo, G. Gaxiola-Castro, F. Chavez, J.T. Pennington, C.A. Collins, J. Field, S. Ralston, K. Sakuma, S. Bograd, F. B. Schwing, Y. Xue, W.J. Sydeman, S.A. Thompson, J.A. Santora, J.Largier, C. Halle, S. Morgan, S.Y. Kim, K.P.B. Merkens, J.A. Hildebrand, and L.M. Munger, State of the California Current 2009-2010: Regional variation persists through transition from La Niña to El Niño (and back?). CalCOFI Reports, 51, 39-69, 2010. CCE LTER Contribution #0257.
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Stukel, M.R., M.D. Ohman, C. Benitez-Nelson and M.R. Landry, Mesozooplankton contribution to vertical carbon export in a coastal upwelling system. Mar. Ecol. Prog. Ser., 491, 47-65, 2013. DOI 10.3354/meps10453. CCE LTER Contribution #0256.
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Taniguchi, D.A.A., M.R. Landry, P.J.S. Franks and K.E. Selph, Size-specific growth and grazing rates for picophytoplankton in coastal and oceanic regions of the eastern Pacific. Mar. Ecol. Prog. Series, 509, 87-101, 2014. DOI 10.3354/meps10895. CCE LTER Contribution #0255; AR2015.
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Dolan, J. R., Landry, M. R., and Ritchie, M. E., The species-rich assemblages of tintinnids (marine planktonic protists) are structured by mouth size. ISME J, 7 (6), 1237-1243, 2013. DOI 10.1038/ismej.2013.23. CCE LTER Contribution #0254.
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Goebel, N.L., C.A. Edwards, J.P. Zehr, M. Follows, and S.G. Morgan, Modeled Phytoplankton Productivity and Diversity in the California Current System. Ecological Modeling, 264 (24), 37-47, 2013. CCE LTER Contribution #0253.
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Pedler, B., Aluwihare, L.I., and Azam, F., Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean. PNAS, 111 (20), 7202-7207, 2014. DOI 10.1073/pnas.1401887111. CCE LTER Contribution #0251; AR2015.
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Sydeman, W.J., S.A. Thompson, M. García-Reyes, M. Kahru, and J.L. Largier, Multivariate ocean-climate indicators (MOCI) for the central California Current: environmental change, 1990-2010.. Progress in Oceanography, 120, 352-369, 2014. DOI http://dx.doi.org/10.1016/j.pocean.2013.10.017. CCE LTER Contribution #0250; AR2014.
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Johnston, T. M. S. and D. L. Rudnick, Trapped diurnal internal tides, propagating semidiurnal internal tides, and mixing estimates in the California Current System from sustained glider observations, 2006-2012. Deep -Sea Research II, 112, 61-78, 2015. DOI 10.1016/j.dsr2.2014.03.009. CCE LTER Contribution #0249; AR2015.
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Lévy, M., Ferrari, R., Franks, P. J. S., Martin, A. P., and Rivière, P., Bringing physics to life at the submesoscale. Geophysical Research Letters, 39 (14), L14602, 2012. DOI 10.1029/2012GL052756. CCE LTER Contribution #0248.
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Petrik, C. M., Jackson, G. A., and Checkley Jr, D. M., Aggregates and their distributions determined from LOPC observations made using an autonomous profiling float. Deep Sea Research Part I: Oceanographic Research Papers, 74, 64-81, 2013. DOI http://dx.doi.org/10.1016/j.dsr.2012.12.009 10.101. CCE LTER Contribution #0247.
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Koslow, J.A., P. Davison, A. Lara-Lopez, M. Ohman, Epipelagic and mesopelagic fishes in the southern California Current System: Ecological interactions and oceanographic influences on their abundance. Journal of Marine Systems, 138, 20-28, 2014. DOI 10.1016/j.jmarsys.2013.09.007. CCE LTER Contribution #0246; AR2015.
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Stuart, R. K., Brahamsha, B., Busby, K., and Palenik, B., Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress. The ISME Journal, online, 1-11, 2013. DOI http://www.nature.com/ismej/journal/vaop/ncurrent/. CCE LTER Contribution #0245.
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Peloquin, J., C. Swan, N. Gruber, M. Vogt , H. Claustre, J. Ras, J. Uitz, R. Barlow, M. Behrenfeld, R. Bidigare, H. Dierssen, G. Ditullio, E. Fernandez, C. Gallienne, S. Gibb, R. Goericke, L. Harding, E. Head, P. Holligan, S. Hooker, D. Karl, M. Landry, R. Letelier, C. A. Llewellyn, M. Lomas, M. Lucas, A. Mannino, J.-C. Marty, B. G. Mitchell, F. Muller-Karger, N. Nelson, C. O'Brien, B. Prezelin, D. Repeta, W. O. Jr. Smith, D. Smythe-Wright, R. Stumpf, A. Subramaniam, K. Suzuki, C. Trees, M. Vernet, N. Wasmund, and S. Wright, The MAREDAT global database of high performance liquid chromatography marine pigment measurements. Earth System Science Data, 5, 109-123, 2013. DOI 10.5194/essd-5-109-2013. CCE LTER Contribution #0244.
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Ohman, M. D., K. Barbeau, P. J. S. Franks, R. Goericke, M. R. Landry, and A. J. Miller, Ecological Transitions in a Coastal Upwelling Ecosystem. Oceanography, 26 (3), 210-219, 2013. DOI 10.5670/oceanog.2013.65. CCE LTER Contribution #0243.
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Ohman, M. D., D. L. Rudnick, A. Chekalyuk, R. E. Davis, R. A. Feely, M. Kahru, H. ‐J. Kim, M. R. Landry, T. R. Martz, C. L. Sabine, and U. Send, Autonomous Ocean Measurements in the California Current Ecosystem. Oceanography, 26 (3), 18-25, 2013. DOI http://dx.doi.org/ 10.5670/oceanog.2013.41. CCE LTER Contribution #0242.
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Sydeman, W. J., S. A. Thompson, J. A. Santora, J. A. Koslow, R. Goericke, and M. D. Ohman, Climate-ecosystem change off southern California: Time-dependent seabird predator–prey numerical responses. Deep-Sea Research II, 112, 158-170, 2015. DOI 10.1016/j.dsr2.2014.03.008. CCE LTER Contribution #0241; AR2015.
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Kahru, M., Z. Lee, R. M. Kudela, M. Manzano-Sarabia and B. G. Mitchell, Multi-satellite time series of inherent optical properties in the California Current. Deep-Sea Research II, 112, 91-106, 2015. DOI 10.1016/j.dsr2.2013.07.023. CCE LTER Contribution #0240; AR2015.
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Taylor, A. G., M. R. Landry, K. E. Selph, J. J. Wokuluk, Temporal and spatial patterns of microbial community biomass and composition in the southern California Current Ecosystem. Deep-Sea Research II, 112, 117-128, 2015. DOI 10.1016/j.dsr2.2014.02.006. CCE LTER Contribution #0239; AR2015.
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Powell, J. R. and M. D. Ohman, Covariability of zooplankton gradients with glider-detected density fronts in the Southern California Current System. Deep-Sea Research II, 112, 79-90, 2015. DOI 10.1016/j.dsr2.2014.04.002. CCE LTER Contribution #0238; AR2015.
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Jacox, M. G., C. A. Edwards, M. Kahru, D. L. Rudnick, and R. M. Kudela, The potential for improving remote primary productivity estimates through subsurface chlorophyll and irradiance measurement. Deep-Sea Research II, 112, 107-116, 2015. DOI 10.1016/j.dsr2.2013.12.008. CCE LTER Contribution #0237; AR2015.
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Davis, A. and E. Di Lorenzo, Interannual forcing mechanisms of California Current transports I: Meridional Currents. Deep Sea Research II, 112, 18-30, 2015. DOI 10.1016/j.dsr2.2014.02.005. CCE LTER Contribution #0236; AR2015.
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Davis, A. and E. Di Lorenzo, Interannual forcing mechanisms of California Current transports II: Mesoscale Eddies. Deep Sea Research II, 112, 31-41, 2015. DOI 10.1016/j.dsr2.2014.02.004. CCE LTER Contribution #0235; AR2015.
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Davison, P., Checkley Jr., D.M., Koslow, J.A., Barlow, J., Carbon export mediated by mesopelagic fishes in the northeast Pacific Ocean. Progress in Oceanography, 116, 14-30, 2013. CCE LTER Contribution #0234.
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Franks, P. J. S., E. Di Lorenzo, N. L. Goebel, F. Chenillat, P. Rivière, C. A. Edwards and A. J. Miller, Modeling Physical-Biological Responses to Long-Term Climate Change in the California Current System. Oceanography, 26 (3), 26-33, 2013. DOI http://dx.doi.org/ 10.5670/oceanog.2013.42. CCE LTER Contribution #0233.
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Putrasahan, D. A., Miller, A. J., and Seo, H., Regional coupled ocean–atmosphere downscaling in the Southeast Pacific: impacts on upwelling, mesoscale air–sea fluxes, and ocean eddies. Ocean Dynamics, 63 (5), 463-488, 2013. DOI 10.1007/s10236-013-0608-2. CCE LTER Contribution #0232.
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Palacios, D. M., E. L. Hazen, I. Schroeder, and S. J. Bograd, Modeling the temperature-nitrate relationship in the coastal upwelling domain of the California Current. Journal of Geophysical Research-Oceans, 118, 1-17, 2013. DOI 10.1002/jgrc.20216. CCE LTER Contribution #0231.
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Décima, M., Landry, M. R., and Popp, B. N., Environmental perturbation effects on baseline delta-15N values and zooplankton trophic flexibility in the southern California Current Ecosystem. Limnology and Oceanography, 58 (2), 624-634, 2013. DOI 10.4319/lo.2013.58.2.0624. CCE LTER Contribution #0230.
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Asch, R. G., and Checkley Jr., D. M., Dynamic height: A key variable for identifying the spawning habitat of small pelagic fishes. Deep Sea Research Part I: Oceanographic Research Papers, 71, 79-91, 2013. DOI http://dx.doi.org/10.1016/j.dsr.2012.08.006. CCE LTER Contribution #0229.
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Di Lorenzo, E., and Ohman, M. D., A double-integration hypothesis to explain ocean ecosystem response to climate forcing. Proceedings of the National Academy of Sciences, 110 (7), 2496-2499, 2013. DOI 10.1073/pnas.1218022110. CCE LTER Contribution #0228.
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Sydeman, W.J., J.A. Santora, S.A. Thompson, B. Marinovic, and E.D. Di Lorenzo, Increasing variance in North Pacific climate relates to unprecedented ecosystem variability off California. Global Change Biology, 19 (6), 1662 - 1675, 2013. DOI 10.1111/gcb.12165. CCE LTER Contribution #0224.
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Henderson, E.E., K.A. Forney, J.P. Barlow, J.A. Hildebrand, A.B. Douglas, J. Calambokidis, and W.J. Sydeman, Effects of fluctuations in sea-surface temperature on the occurrence of small cetaceans off Southern California. Fishery Bulletin, 112, 159-177, 2014. DOI 10.7755/FB.112.2-3.5. CCE LTER Contribution #0223; AR2015.
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Ohman, M. D., J. R. Powell, M. Picheral, and D. W. Jensen, Mesozooplankton and particulate matter responses to a deep-water frontal system in the southern California Current System. Journal of Plankton Research, 34 (9), 815-827, 2012. DOI 10.1093/plankt/fbs028. CCE LTER Contribution #0222.
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Hazen, E.L., W.J. Sydeman, I.D. Schroeder, S.A. Thompson, B.K. Wells, S.T. Lindley, C.B. Grimes, S.J. Bograd, and F.B. Schwing, Status of the California Current Ecosystem: Major ecosystem based management drivers and pressures in Technical background for an integrated ecosystem assessment of the California Current: Groundfish, salmon, green sturgeon, and ecosystem health. NOAA Technical Memorandum, NMFS-NWFSC-109, 99-110, 2011. CCE LTER Contribution #0221.
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Bjorkstedt, E.P., R. Goericke, S. McClatchie, E. Weber, W. Watson, N. Lo, B. Peterson, B. Emmett, R. Brodeur, J. Peterson, M. Litz, J. Gomez-Valdez, G. Gaxiola-Castro, B. Lavaniegos, F. Chavez, C.A., Collins, J. Field, K. Sakuma, P. Warzybok, R. Bradley, J. Jahncke, S. Bograd, F. Schwing, G.S. Campbell, J. Hildebrand, W. Sydeman, S.A. Thompson, J. Largier, C. Halle, S.Y. Kim, and J. Abell, State of the California Current 2010-2011: Regionally variable responses to a strong (but fleeting?) La Niña. CalCOFI Reports, 52, 36-68, 2011. CCE LTER Contribution #0220.
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Kahru, M., Kudela, R.l M., Manzano-Sarabia, M., and Mitchell, B. G., Trends in the surface chlorophyll of the California Current: Merging data from multiple ocean color satellites. Deep-Sea Research Part II, 77–80, 89-98, 2012. DOI http://dx.doi.org/10.1016/j.dsr2.2012.04.007. CCE LTER Contribution #0219.
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Kahru, M., Di Lorenzo, E., Manzano-Sarabia, M., and Mitchell, B. G., Spatial and temporal statistics of sea surface temperature and chlorophyll fronts in the California Current. Journal of Plankton Research, 34 (9), 749-760, 2012. DOI 10.1093/plankt/fbs010. CCE LTER Contribution #0218.
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Koslow, J.A., R. Goericke, A. Lara-Lopez, and W. Watson, Impact of declining intermediate-water oxygen on deepwater fishes in the California Current. Marine Ecology Progress Series, 436, 207-218, 2011. DOI 10.3354/meps09270. CCE LTER Contribution #0217.
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Lara-Lopez, A. L., Davison, P., and Koslow, J. A., Abundance and community composition of micronekton across a front off Southern California. Journal of Plankton Research, 34 (9), 828-848, 2012. DOI 10.1093/plankt/fbs016. CCE LTER Contribution #0216.
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Davison, P., The specific gravity of mesopelagic fish from the northeastern Pacific Ocean and its implications for acoustic backscatter. ICES Journal of Marine Science: Journal du Conseil, 68 (10), 2064-2074, 2011. DOI 10.1093/icesjms/fsr140. CCE LTER Contribution #0215.
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Goericke, R., The Size Structure of Marine Phytoplankton — What Are the Rules?. CalCOFI Reports, 52, 198-204, 2011. CCE LTER Contribution #0214.
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Goericke, R., The Structure of Marine Phytoplankton Communities — Patterns, Rules and Mechanisms. CalCOFI Reports, 52, 182-197, 2011. CCE LTER Contribution #0213.
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Taniguchi, D.A.A., P.J.S. Franks and M.R. Landry, Estimating size-dependent growth and grazing rates and their associate error using the dilution method. Limnology and Oceanography: Methods, 10, 868-881, 2012. DOI 10.4319/lom.2012.10.868. CCE LTER Contribution #0212.
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Samo, T., B. Pedler, I. Ball, A.L. Pasulka, A.G. Taylor, L.I. Aluwihare, F. Azam, R. Goericke and M.R. Landry, Enhanced responses of heterotrophic bacteria at water mass frontal zones in the California Current Ecosystem.. Journal of Plankton Research, 34 (9), 802-814, 2012. DOI 10.1093/plankt/fbs048. CCE LTER Contribution #0211.
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Li, Q. P., Franks, P. J. S., Ohman, M. D., and Landry, M. R., Enhanced nitrate fluxes and biological processes at a frontal zone in the southern California current system. Journal of Plankton Research, 34 (9), 790-801, 2012. DOI 10.1093/plankt/fbs006. CCE LTER Contribution #0210.
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Chekalyuk, A. M., Landry, M. R., Goericke, R., Taylor, A. G., and Hafez, M. A., Laser fluorescence analysis of phytoplankton across a frontal zone in the California Current ecosystem. Journal of Plankton Research, 34 (9), 761-777, 2012. DOI 10.1093/plankt/fbs034. CCE LTER Contribution #0209.
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Taylor, A.G., R. Goericke, M.R. Landry, K.E. Selph, D.A. Wick and M.J. Roadman, Sharp gradients in phytoplankton community structure across a frontal zone in the California Current Ecosystem. Journal of Plankton Research, 34 (9), 778-789, 2012. DOI 10.1093/plankt/fbs036. CCE LTER Contribution #0208.
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Landry, M. R., Ohman, M. D., Goericke, R., Stukel, M. R., Barbeau, K. A., Bundy, R.M., and Kahru, M., Pelagic community responses to a deep-water front in the California Current Ecosystem: overview of the A-Front Study. Journal of Plankton Research, 34 (9), 739-748, 2012. DOI 10.1093/plankt/fbs025. CCE LTER Contribution #0207.
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Goldstein, M. C., Rosenberg, M., and Cheng, L., Increased oceanic microplastic debris enhances oviposition in an endemic pelagic insect. Biology Letters, 8 (5), 817-820, 2012. DOI 10.1098/rsbl.2012.0298. CCE LTER Contribution #0206.
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Chen, B., M. R. Landry, B. Huang and H. Liu, Does warming enhance the effect of microzooplankton grazing on marine phytoplankton in the ocean?. Limnology and Oceanography, 57 (2), 519-526, 2012. DOI 10.4319/lo.2012.57.2.0519. CCE LTER Contribution #0205.
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Suryan, R. M., Santora, J. A., and Sydeman, W. J., New approach for using remotely sensed chlorophyll a to identify seabird hotspots. Marine Ecology Progress Series, 451, 213-225, 2012. DOI 10.3354/meps09597. CCE LTER Contribution #0204.
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Hofmann, G. E., Smith, J. E., Johnson, K. S., Send, U., Levin, L. A., Micheli, F., Paytan, A., Price, N. N., Peterson, B., Takeshita, Y., Matson, P. G., Crook, E. D., Kroeker, K. J., Gambi, M. C., Rivest, E. B., Frieder, C. A., Yu, P. C., and Martz, T. R., High-Frequency Dynamics of Ocean pH: A Multi-Ecosystem Comparison. PLoS ONE, 6 (12), e28983, 2011. CCE LTER Contribution #0201.
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Bestelmeyer, B.T., Ellison, A.M., Fraser.W.R., Gorman, K. B., Holbrooke, S. J., Laney, C. M., Ohman, M.D., Peters, D.P.C., Pillsbury, F.C., Rassweiler, A., Schmitt, R.J., and Sharmai, S., Analysis of abrupt transitions in ecological systems. Ecosphere, 2(12):129, 1-26, 2011. DOI 10.1890/ES11-00216.1. CCE LTER Contribution #0199.
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Bargu, S., Silver, M. W., Ohman, M. D., Benitez-Nelson, C. R., and Garrison, D. L., Mystery behind Hitchcock's birds. Nature Geoscience, 5 (1), 2-3, 2012. DOI 10.1038/ngeo1360. CCE LTER Contribution #0198.
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King, A. L., Buck, K. N., and Barbeau, K. A., Quasi-Lagrangian drifter studies of iron speciation and cycling off Point Conception, California. Marine Chemistry, 128-129, 1-12, 2012. DOI 10.1016/j.marchem.2011.11.001. CCE LTER Contribution #0197.
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Ohman, M. D., Rau, G. H., and Hull, P. M., Multi-decadal variations in stable N isotopes of California Current zooplankton. Deep Sea Research Part I: Oceanographic Research Papers, 60, 46-55, 2012. DOI 10.1016/j.dsr.2011.11.003 (2012). CCE LTER Contribution #0196.
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Ohman, M. D., Estimation of mortality for stage-structured zooplankton populations: What is to be done?. Journal of Marine Systems, 93, 4-10, 2012. CCE LTER Contribution #0195.
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Thompson, S.A., Sydeman, W.J., Santora, J.A., Black, B.A., Suryan, R.M., Calambokidis, J., Peterson, W.T., and Bograd, S.J., Linking predators to seasonality of upwelling: Using food web indicators and path analysis to infer trophic connections. Progress in Oceanography, 101 (1), 106-120, 2012. CCE LTER Contribution #0194.
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Booth, J. A. T., McPhee-Shaw, E. E., Chua, P., Kingsley, E., Denny, M., Phillips, R., Bograd, S. J., Zeidberg, L. D., and Gilly, W. F., Natural intrusions of hypoxic, low pH water into nearshore marine environments on the California coast. Continental Shelf Research, 45, 108-115, 2012. DOI http://dx.doi.org/10.1016/j.csr.2012.06.009. CCE LTER Contribution #0193.
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Whitney, F.A., Bograd, S.J., and Ono, T., Nutrient enrichment of the subarctic Pacific Ocean pycnocline. Geophysical Research Letters, 40 (10), 2200 - 2205, 2013. DOI 10.1002/grl.50439. CCE LTER Contribution #0192.
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Wilson, S.E., Ruhl, H.A., and K.L. Smith, Jr., Seasonal and inter-annual contribution of zooplankton fecal pellets to carbon flux in the abyssal northeast Pacific. Limnology and Oceanography, 58 (3), 881-892, 2013. DOI 10.4319/lo.2013.58.3.0881. CCE LTER Contribution #0191.
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Zhang, J., Fleming, J., and Goericke, R., Fishermen's perspectives on climate variability. Marine Policy, 36 (2), 466-472, 2012. DOI 10.1016/j.marpol.2011.06.001. CCE LTER Contribution #0190.
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Freeman, L. A., Miller, A. J., Norris, R. D., and Smith, J. E., Classification of remote Pacific coral reefs by physical oceanographic environment. Journal of Geophysical Research - Oceans, 117 (C2), C02007, 2012. DOI 10.1029/2011jc007099. CCE LTER Contribution #0189.
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Song, H., Miller, A. J., McClatchie, S., Weber, E. D., Nieto, K. M., and Checkley Jr., D. M., Application of a data-assimilation model to variability of Pacific sardine spawning and survivor habitats with ENSO in the California Current System. Journal of Geophysical Research, 117 (C3), C03009, 2012. DOI 10.1029/2011jc007302. CCE LTER Contribution #0188.
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Yeh, S. -W., Kang, Y. -J., Noh, Y., and Miller, A. J., The North Pacific Climate Transitions of the Winters of 1976/77 and 1988/89. Journal of Climate, 24 (4), 1170-1183, 2010. DOI 10.1175/2010jcli3325.1. CCE LTER Contribution #0187.
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Song, H., Miller, A. J., Cornuelle, B. D., and Di Lorenzo, E., Changes in upwelling and its water sources in the California Current System driven by different wind forcing. Dynamics of Atmospheres and Oceans, 52 (1-2), 170-191, 2011. CCE LTER Contribution #0186.
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Bromirski, P. D., Miller, A. J., Flick, R. E., and Auad, G., Dynamical suppression of sea level rise along the Pacific coast of North America: Indications for imminent acceleration. J. Geophys. Res., 116 (C7), C07005, 2011. DOI 10.1029/2010jc006759. CCE LTER Contribution #0185.
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Gleason, L. U., and Burton, R. S., High-throughput molecular identification of fish eggs using multiplex suspension bead arrays. Molecular Ecology Resources, 12, 57-66, 2012. DOI 10.1111/j.1755-0998.2011.03059.x. CCE LTER Contribution #0184.
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Macías, D., Landry, M. R., Gershunov, A., Miller, A. J., and Franks, P. J. S., Climatic control of upwelling variability along the western North-American coast. PLoS ONE, 7 (1), 13, 2012. DOI 10.1371/journal.pone.0030436. CCE LTER Contribution #0183.
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Macías, D., Franks, P. J. S., Ohman, M. D., and Landry, M. R., Modeling the effects of coastal wind- and wind-stress curl-driven upwellings on plankton dynamics in the Southern California current system. Journal of Marine Systems, 94, 107-119, 2012. CCE LTER Contribution #0182.
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Linacre, L. P., M. R. Landry, R. Cajal-Medrano, J. R. Lara-Lara, J. M. Hernández-Ayón, R. R., Mouriño-Pérez, E. García-Mendoza and C. Bazán-Guzmán, Temporal dynamics of carbon flow through the microbial plankton community in a coastal upwelling system off northern Baja California, Mexico. Marine Ecology Progress Series, 461, 31-46, 2012. DOI 10.3354/meps09782. CCE LTER Contribution #0181.
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Stukel, M. R., Landry, M. R., Ohman, M. D., Goericke, R., Samo, T., and Benitez-Nelson, C. R., Do inverse ecosystem models accurately reconstruct plankton trophic flows? Comparing two solution methods using field data from the California Current. Journal of Marine Systems, 91 (1), 20-33, 2012. DOI 10.1016/j.jmarsys.2011.09.004. CCE LTER Contribution #0180.
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Stukel, M. R., Landry, M. R., Benitez-Nelson, C. R., and Goericke, R., Trophic cycling and carbon export relationships in the California Current Ecosystem. Limnology and Oceanography, 56 (5), 1866-1878, 2011. DOI 10.4319/lo.2011.56.5.1866. CCE LTER Contribution #0179.
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Sydeman, W. J., Thompson, S. A., Field, J. C., Peterson, W. T., Tanasichuk, R. W., Freeland, H. J., Bograd, S. J., and Rykaczewski, R, R., Does positioning of the North Pacific Current affect downstream ecosystem productivity?. Geophys. Res. Lett., 38 (12), L12606, 2011. DOI 10.1029/2011gl047212. CCE LTER Contribution #0178.
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Field, D., Cayan, D., and Chavez, F., Secular warming in the California Current and North Pacific. Reports of California Cooperative Oceanic Fisheries Investigations, 47, 92, 2006. CCE LTER Contribution #0176.
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Mazzillo, F.F.M., Staaf, D.J., Field, J.C., Carter, M.L., and Ohman, M.D., A note on the detection of the neurotoxin domoic acid in beach-stranded Dosidicus gigas in the Southern California Bight. CalCOFI Reports, 52, 109-115, 2011. CCE LTER Contribution #0173.
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Todd, R. E., Rudnick, D. L., Davis, R. E., and Ohman, M. D., Underwater gliders reveal rapid arrival of El Niño effects off California's coast. Geophys. Res. Lett., 38 (3), L03609, 2011. DOI 10.1029/2010gl046376. CCE LTER Contribution #0172.
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Li, Q. P., Franks, P. J. S., and Landry, M. R., Microzooplankton grazing dynamics: parameterizing grazing models with dilution experiment data from the California Current Ecosystem. Marine Ecology Progress Series, 438, 59-69, 2011. DOI 10.3354/meps09320. CCE LTER Contribution #0171.
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Black, B. A., Schroeder, I. D., Sydeman, W. J., Bograd, S. J., Wells, B. K., and Schwing, F. B., Winter and summer upwelling modes and their biological importance in the California Current Ecosystem. Global Change Biology, 17 (8), 2536-2545, 2011. DOI 10.1111/j.1365-2486.2011.02422.x. CCE LTER Contribution #0170.
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Tai, V., Burton, R.S., and Palenik, B., Temporal and spatial distributions of marine Synechococcus in the Southern California Bight assessed by hybridization to bead-arrays. Marine Ecology Progress Series, 426, 133-147, 2011. DOI 10.3354/meps09030. CCE LTER Contribution #0169.
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Dorman, J.G., Powell, T.M., Sydeman, W.J., and Bograd, S.J., Advection and starvation cause krill (Euphausia pacifica) decreases in 2005 Northern California coastal populations: Implications from a model study. Geophysical Research Letters, 38 (4), L04605, 2011. CCE LTER Contribution #0168.
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Jackson, G.A., and Checkley Jr, D.M., Particle size distributions in the upper 100 m water column and their implications for animal feeding in the plankton. Deep Sea Research Part I: Oceanographic Research Papers, 58, 283-297, 2011. CCE LTER Contribution #0167.
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Taylor, A. G., Landry, M. R., Selph, K. E., and Yang, E. J., Biomass, size structure and depth distributions of the microbial community in the eastern equatorial Pacific. Deep Sea Research Part II: Topical Studies in Oceanography, 58 (3-4), 342-357, 2011. CCE LTER Contribution #0165.
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McClatchie, S., Goericke, R., Cosgrove, R., Auad, G., and Vetter, R., Oxygen in the Southern California Bight: Multidecadal trends and implications for demersal fisheries. Geophysical Research Letters, 37, L19602, 2010. DOI 10.1029/2010gl044497. CCE LTER Contribution #0164 ISI:000282433000006.
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Karasti, H., Baker, K. S., and Millerand, F., Infrastructure Time: Long-term Matters in Collaborative Development. Computer Supported Cooperative Work-the Journal of Collaborative Computing, 19 (3-4), 377-415, 2010. DOI 10.1007/s10606-010-9113-z. CCE LTER Contribution #0163 ISI:000282318300007.
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Ohman, M. D., Lavaniegos, B. E., and Townsend, A. W., Multi-decadal variations in calcareous holozooplankton in the California Current System: Thecosome pteropods, heteropods, and foraminifera. Geophysical Research Letters, 36, L18608, 2009. DOI L18608 10.1029/2009gl039901. CCE LTER Contribution #0161 ISI:000270235000004.
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Munro, D. R., Quay, P. D., Juranek, L. W., and Goericke, R., Biological production rates off the Southern California coast estimated from triple O2 isotopes and O2/Ar gas ratios. Limnology and Oceanography, 58 (4), 1312-1328, 2013. DOI 10.4319/lo.2013.58.4.1312. CCE LTER Contribution #0160.
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Schartau, M., Landry, M.R., and Armstrong, R.A., Density estimation of plankton size spectra: a reanalysis of IronEx II data. Journal of Plankton Research, 32 (8), 1167, 2010. CCE LTER Contribution #0159.
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Kahru, M., Gille, S. T., Murtugudde, R., Strutton, P. G., Manzano-Sarabia, M., Wang, H., and Mitchell, B. G., Global correlations between winds and ocean chlorophyll. J. Geophys. Res., 115 (C12), C12040, 2010. DOI 10.1029/2010jc006500. CCE LTER Contribution #0154.
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Black, B. A., Schroeder, I. D., Sydeman, W. J., Bograd, S. J., and Lawson, P. W., Wintertime ocean conditions synchronize rockfish growth and seabird reproduction in the central California Current ecosystem. Canadian Journal of Fisheries and Aquatic Sciences, 67 (7), 1149-1158, 2010. DOI 10.1139/f10-055. CCE LTER Contribution #0152 ISI:000279739900009.
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Kilpatrick, T., Schneider, N., and Di Lorenzo, E., Generation of Low-Frequency Spiciness Variability in the Thermocline*. Journal of Physical Oceanography, 41 (2), 365-377, 2011. DOI 10.1175/2010jpo4443.1. CCE LTER Contribution #0151.
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Combes, V., Chenillat, F., Di Lorenzo, E., Rivière, P., Ohman, M. D., and Bograd, S. J., Cross-shore transport variability in the California Current: Ekman upwelling vs. eddy dynamics. Progress in Oceanography, 109, 78-89, 2013. DOI http://dx.doi.org/10.1016/j.pocean.2012.10.001. CCE LTER Contribution #0150.
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Karasti, H., and Baker, K., Digital Data Practices and the Global Long Term Ecological Research Program. International Journal of Digital Curation, 3 (2), 42-58, 2008. CCE LTER Contribution #0146.
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Aronova, E., Baker, K., and Oreskes, N., Big Science and Big Data in Biology: From the International Geophysical Year through the International Biological Program to the Long Term Ecological Research (LTER) Network, 1957-Present. Historical Studies in the Natural Sciences, 40 (2), 183-224, 2010. DOI 10.1525/hsns.2010.40.2.183. CCE LTER Contribution #0145.
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Sieracki, M. E., Gilg, I. C., Thier, E. C., Poulton, N. J., and Goericke, R., Distribution of planktonic aerobic anoxygenic photoheterotrophic bacteria in the northwest Atlantic. Limnology and Oceangraphy, 51 (1), 38-46, 2006. CCE LTER Contribution #0144.
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McClatchie, S., Goericke, R., Schwing, F. B., Bograd, S. B., Peterson, W., Emmett, R., Charter, R., Watson, W., Lo, N., Hill, K., Collins, C., Kahru, M., Mitchell, B. G., Koslow, J. A., Gomes-Valdes, J., Lavaniegos, B. E., Gaxiola-Castro, G., Gottschalck, J., L'Heureux, M., Xue, Y., Manzano-Sarabia, M., Bjorkstedt, E., Ralston, S., Field, J., Rogers-Bennet, L., Munger, L., Campbell, G., Merkens, K., Camacho, D., Havron, A., Douglas, A., and Hildebrand, J., The State of the California Current, Spring 2008-2009: Cold conditions drive regional differences in coastal production. CalCOFI Reports, 50, 43-68, 2009. CCE LTER Contribution #0143.
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Goetze, E., and Ohman, M. D., Integrated molecular and morphological biogeography of the calanoid copepod family Eucalanidae. Deep Sea Research Part II: Topical Studies in Oceanography, 57 (24-26), 2110-2129, 2010. CCE LTER Contribution #0142.
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Gorsky, G., Ohman, M.D., Picheral, M., Gasparini, S., Stemmann, L., Romagnan, J.B., Cawood, A., Pesant, S., García-Comas, C., and Prejger, F., Digital zooplankton image analysis using the ZooScan integrated system. Journal of Plankton Research, 32 (3), 285, 2010. CCE LTER Contribution #0141.
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Meador, T. B., Aluwihare, L. I., and Mahaffey, C., Isotopic heterogeneity and cycling of organic nitrogen in the oligotrophic ocean. Limnology and Oceanography, 52 (3), 934-947, 2007. CCE LTER Contribution #0139.
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Wolf, S. G., Sydeman, W. J., Abraham, C. L., Hipfner, J. M., Tershy, B., and Croll, D., Range-wide reproductive consequences of climate variability for the seabird Cassin’s Auklet Ptychoramphus aleuticus. Ecology, 90 (3), 742-753, 2009. CCE LTER Contribution #0138.
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Wolf, S. G., Snyder, M. A., Sydeman, W. J., Doak, D. F., and Croll, D. A., Predicting population consequences of ocean climate change for an ecosystem sentinel, the seabird Cassin's auklet. Global Change Biology, 16 (7), 1923-1935, 2010. DOI 10.1111/j.1365-2486.2010.02194.x. CCE LTER Contribution #0137 ISI:000278308100003.
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Sydeman, W. J., and Bograd, S. J., Marine ecosystems, climate and phenology: Introduction. Marine Ecology Progress Series, 393, 185-188, 2009. DOI 10.3354/meps08382. CCE LTER Contribution #0136.
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Schwing, F. B., Mendelssohn, R. M., Bograd, S. J., Overland, J. E., Wang, M., and Ito, S. I., Climate change, teleconnection patterns, and regional processes forcing marine populations in the Pacific. Journal of Marine Systems, 79, 245-257, 2010. DOI 10.1016/j.jmarsys.2008.11.027. CCE LTER Contribution #0135.
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Mitchell, B. G., and Kahru, M., Bio-optical algorithms for ADEOS-2 GLI. Journal of the Remote Sensing Society of Japan, 29 (1), 80-85, 2009. CCE LTER Contribution #0134.
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Murakami, H., Sasaoka, K., Hosoda, K., Fukushima, H., Toratani, M., Frouin, R., Mitchell, B. G., Kahru, M., Deschamps, P. -Y., Clark, D., Flora, S., Kishino, M., Saitoh, S. -I., Asanuma, I., Tanaka, A., Sasaki, H., Yokouchi, K., Kiyomoto, Y., Saito, H., Dupouy, C., Siripong, A., Matsumura, S., and Ishizaka, J., Validation of ADEOS-2 GLI ocean color products using in-situ observations. Journal of Oceanography, 62 (3), 373-393, 2006. CCE LTER Contribution #0133.
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Tai, V., and Palenik, B., Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site. The ISME Journal, 3, 903-915, 2009. DOI 10.1038/ismej.2009.35. CCE LTER Contribution #0132.
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Décima, M., Landry, M. R., and Rykaczewski, R. R., Broad scale patterns in mesozooplankton biomass and grazing in the eastern equatorial Pacific. Deep Sea Research Part II: Topical Studies in Oceanography, 58 (3-4), 387-399, 2011. CCE LTER Contribution #0131.
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Décima, M., Ohman, M. D., and DeRobertis, A., Body size-dependence of euphausiid spatial patchiness. Limnology and Oceanography, 55 (2), 777-788, 2010. CCE LTER Contribution #0130.
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Smith, Jr., K. L., Ruhl, H. A., Betts, B. J., Billett, D. S. M., Lampitt, R. S., and Kaufmann, R. S., Climate, carbon cycling and deep-ocean ecosystems. Proceedings of the Natural Academy of Sciences, 106 (46), 19211-19218, 2009. DOI 1073/pnas.0908322106. CCE LTER Contribution #0129.
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Holland, N. D., Jones, W. J., Ellena, J., Ruhl, H. A., and Smith, Jr., K. L., A new deep-sea species of epibenthic acorn worm (Hemichordata, Enteropneusta). Zoosystema, 31 (2), 333-346, 2009. CCE LTER Contribution #0128.
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Poulin, F. J., and Franks, P. J. S., Size-structured planktonic ecosystems: constraints, controls and assembly instructions. Journal of Plankton Research, 32 (8), 1121-1130, 2010. DOI 10.1093/plankt/fbp145. CCE LTER Contribution #0127 ISI:000280562300003.
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Menge, Bruce A., Chan, Francis, Nielsen, Karina, Di Lorenzo, Emanuele, and Lubchenco, Jane, Climatic variation alters supply-side ecology: impact of climate patterns on phytoplankton and mussel recruitment. Ecological Monographs, 79 (3), 379-395, 2009. CCE LTER Contribution #0126.
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Porter, J. H., Nagy, E., Kratz, T. K., Hanson, P., Collins, S. L., and Arzberger, P., New eyes on the world: advanced sensors for ecology. BioScience, 59, 385-397, 2009. CCE LTER Contribution #0125.
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Gilfillan, L. R., Ohman, M. D., Doyle, M. J., and Watson, W., Occurrence of plastic micro-debris in the southern California Current System. California Cooperative Oceanic Fisheries Investigations Reports, 50, 123-133, 2009. CCE LTER Contribution #0124.
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Linacre, L. P., Landry, M. R., Lara-Lara, J. R., Hernandez-Ayon, J. M., and Bazan-Guzman, C., Picoplankton dynamics during contrasting seasonal oceanographic conditions in a coastal upwelling station off Northern Baja California, México. Journal of Plankton Research, 32 (4), 539-557, 2010. DOI 10.1093/plankt/fbp148. CCE LTER Contribution #0123.
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Aksnes, D. L., and Ohman, M. D., Multi-decadal shoaling of the euphotic zone in the southern sector of the California Current System. Limnology and Oceanography, 54 (4), 1272-1281, 2009. CCE LTER Contribution #0114.
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Hereu, C. M., Lavaniegos, B. E., and Goericke, R., Grazing impact of salp (Tunicata, Thaliacea) assemblages in the eastern tropical North Pacific. Journal of Plankton Research, 32 (6), 785-804, 2010. DOI 10.1093/plankt/fbq005. CCE LTER Contribution #0113.
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McClatchie, S., Goericke, R., Koslow, J. A., Schwing, F. B., Bograd, S. J., Charter, R., Watson, W., Lo, N., Hill, K., Gottschalk, J., L'Heureux, M., Xue, Y., Peterson, W. T., Emmett, R., Collins, C., Gaxiola-Castro, G., Durazo, R., Kahru, M., Mitchell, B. G., Hyrenbach, K. D., Sydeman, W. J., Bradley, R. W., Warzybok, P., and Bjorkstedt, E., The State of the California Current, 2007-2008: La Nina Conditions and their Effects on the Ecosystem. CalCOFI Reports, 49, 39-76, 2008. CCE LTER Contribution #0112.
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Landry, M. R., Ohman, M. D., Goericke, R., Stukel, M. R., and Tsyrklevich, K., Lagrangian studies of phytoplankton growth and grazing relationships in a coastal upwelling ecosystem off Southern California. Progress in Oceanography, 83, 208-216, 2009. DOI 10.1016/j.pocean.2009.07.026. CCE LTER Contribution #0110.
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Landry, M.R., Selph, K.E., Taylor, A.G., Décima, M., Balch, W.M., and Bidigare, R.R., Phytoplankton growth, grazing and production balances in the HNLC equatorial Pacific. Deep Sea Research Part II: Topical Studies in Oceanography, 2010. CCE LTER Contribution #0109.
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Di Lorenzo, E., Cobb, KM, Furtado, JC, Schneider, N., Anderson, BT, Bracco, A., Alexander, MA, and Vimont, DJ, Central Pacific El Niño and decadal climate change in the North Pacific Ocean. Nature Geoscience, 3 (11), 762-765, 2010. CCE LTER Contribution #0108.
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Hannides, C. C. S., Popp, B. N., Landry, M. R., and Graham, B. S., Quantification of zooplankton trophic position in the North Pacific Subtropical Gyre using stable nitrogen isotopes. Limnology and Oceanography, 54 (1), 50-61, 2009. CCE LTER Contribution #0107.
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Hannides, C. C. S., Landry, M. R., Benitez-Nelson, C. R., Styles, R. M., Montoya, J. P., and Karl, D. M., Export stoichiometry and migrant-mediated flux of phosphorus in the North Pacific Subtropical Gyre. Deep-Sea Research I, 56, 73-88, 2008. DOI 10.1016/j.dsr.2008.08.003. CCE LTER Contribution #0106.
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Li, Q. P., Franks, P. J. S., Landry, M. R., Goericke, R., and Taylor, A. G., Modeling phytoplankton growth rates and chlorophyll to carbon ratios in California coastal and pelagic ecosystems. Journal of Geophysical Research, 115, G04003, 2010. DOI 10.1029/2009jg001111. CCE LTER Contribution #0105 ISI:000282768500001.
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Fiechter, J., Moore, A. M., Edwards, C. A., Bruland, K. W., Di Lorenzo, E., Lewis, C. V. W., Powell, T. M., Curchitser, E. N., and Hedstrom, K., Modeling iron limitation on primary production in the coastal Gulf of Alaska. Deep-Sea Research II, 56, 2503-2519, 2009. DOI 10.1016/j.dsr2.2009.02.010. CCE LTER Contribution #0102.
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Ceballos, L., Di Lorenzo, E., Schneider, N., Taguchi, B., and Hoyas, C. D., North Pacific Gyre Oscillation synchronizes climate fluctuations in the eastern and western North Pacific. Journal of Climate, 22, 5163-5174, 2009. DOI 10.1175/2009jcli2848.1. CCE LTER Contribution #0101.
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Sydeman, W. J., Mills, K. L., Thompson, S. A., Santora, J. A., Bertram, D. F., Morgan, K. H., Hipfner, M. A., Wells, B. K., and Wolf, S. G., Seabirds and climate in the California Current - a synthesis of change. California Cooperative Oceanic Fisheries Investigation Reports, 50, 82-107, 2009. CCE LTER Contribution #0100.
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Baker, K, and Yarmey, L, Data Stewardship: Environmental Data Curation and a Web-of-Repositories. International Journal of Digital Curation, 4 (2), 2009. CCE LTER Contribution #0099.
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Dupont, C. L., Buck, K. N., Palenik, B., and Barbeau, K., Nickel utilization in phytoplankton assemblages from contrasting oceanic regimes. Deep-Sea Research Part I, 57 (4), 553-566, 2010. DOI 10.1016/j.dsr.2009.12.014. CCE LTER Contribution #0098.
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Fuchs, H. L., and Franks, P. J. S., Plankton community properties determined by nutrients and size-selective feeding. Marine Ecology-Progress Series, 413, 1-15, 2010. DOI 10.3354/meps08716. CCE LTER Contribution #0097 ISI:000281566900001.
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Chhak, K., Di Lorenzo, E., Schneider, N., and Cummins, P., Forcing of low-frequency ocean variability in the Northeast Pacific. Journal of Climate, 22 (5), 1255-1276, 2009. DOI 10.1175/2008jcli2639.1. CCE LTER Contribution #0096.
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Schroeder, I. D., Sydeman, W. J., Sarkar, N., Bograd, S. J., Schwing, F. B., and Thompson, S. A., Winter pre-conditioning of seabird phenology in the California Current. Marine Ecology Progress Series, 393, 211-223, 2009. DOI 10.3354/meps08103. CCE LTER Contribution #0095.
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Di Lorenzo, E. J., Fiechter, J., Schneider, N., Bracco, A., Miller, A. J., Franks, P. J. S., Bograd, S. J., Moore, A. M., Thomas, A. C., Crawford, W. J., Peña, A., and Hermann, A., Nutrient and salinity decadal variations in the central and eastern North Pacific. Geophysical Research Letters, 36, L14601, 2009. DOI 10.1029/2009gl038261. CCE LTER Contribution #0094.
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Bograd, S. J., Schroeder, I., Sarkar, N., Qiu, X., Sydeman, W. J., and Schwing, F. B., The phenology of coastal upwelling in the California Current. Geophysical Research Letters, 36, L01602, 2009. DOI 10.1029/2008gl035933. CCE LTER Contribution #0093.
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Bond, N A., Batchelder, H. P., and Bograd, S. J., Forecasting northeast Pacific ecosystem responses to the La Niña of Fall-Winter 2007. EOS, Transactions of the American Geophysical Union, 89 (35), 321-322, 2008. DOI 10.1029/2008eo350002. CCE LTER Contribution #0092.
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Vardaro, M F., Ruhl, H A., and Smith, Jr., K L., Climate variation, carbon flux, and bioturbation in the abyssal North Pacific. Limnology and Oceanography, 54 (6), 2081-2088, 2009. CCE LTER Contribution #0090.
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Sherman, A D., and Smith, Jr., K L., Deep-sea benthic boundary layer communities and food supply: a long-term monitoring strategy. Deep-Sea Research II, 56 (19-20), 1754-1762, 2009. DOI 10.1016/j.dsr2.2009.05.020. CCE LTER Contribution #0089.
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McGill, P R., Sherman, A D., Hobson, B W., Henthorn, R G., and Smith, Jr., K L., Initial deployments of the Rover, an autonomous bottom-transecting instrument platform. Journal of Ocean Technology, 4 (2), 54-70, 2009. CCE LTER Contribution #0088.
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Drazen, J. C., Popp, B. N., Choy, C. A., Clemente, T., De Forest, L., and Smith, Jr., K. L., Bypassing the abyssal benthic food web: Macrourid diet in the eastern North Pacific inferred from stomach content and stable isotopes analyses. Limnology and Oceanography, 53, 2644-2654, 2008. CCE LTER Contribution #0087.
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Drazen, J. C., Phleger, C. F., Guest, M. A., and Nichols, P. D., Lipid, sterols and fatty acid composition of abyssal holothurians and ophiuroids from the North-East Pacific Ocean: Food web implications. Comparative Biochemistry and Physiology, Part B, 151, 79-87, 2008. DOI 10.1016/j.cbpb.2008.05.013. CCE LTER Contribution #0086.
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Hsieh, C. -H., Kim, H. -J., Watson, W., Di Lorenzo, E., and Sugihara, G., Climate-driven changes in abundance and distribution of larvae of oceanic fishes in the southern California region. Global Change Biology, 15, 2137-2152, 2009. DOI 10.1111/j.1365-2486.2009.01875.x. CCE LTER Contribution #0085.
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Samo, T. J., Malfatti, F., and Azam, F., A new class of transparent organic particles in seawater visualized by a novel fluorescence approach. Aquatic Microbial Ecology, 53, 307-321, 2008. DOI 10.3354/ame01251. CCE LTER Contribution #0083.
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Barlow, J., Kahru, M., and Mitchell, B. G., Cetacean biomass, prey consumption, and primary production requirements in the California Current ecosystem. Marine Ecology Progress Series, 371, 285-295, 2008. DOI 10.3354/meps07695. CCE LTER Contribution #0082.
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Ohman, M. D., and Hobbie, J. E., Aquatic Research in the U.S. LTER Network. Limnology and Oceanography Bulletin, 17 (3), 74-79, 2008. CCE LTER Contribution #0081.
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Kahru, M., Kudela, R., Manzano-Sarabia, M., and Mitchell, B. G., Trends in primary production in the California Current detected with satellite data. Journal of Geophysical Research, 114 (C02004), 7 pgs, 2009. DOI 10.1029/2008jc004979. CCE LTER Contribution #0077.
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Maye, A., Hsieh, C. -H., Sugihara, G., and Brembs, B., Order in spontaeous behavior. PLoS ONE, 2 (5), e443, 2007. DOI 10.137/journal.pone.0000443. CCE LTER Contribution #0076.
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May, R. M., Levin, S. A., and Sugihara, G., Ecology for bankers. Nature, 451, 893-895, 2008. DOI 10.1038/451893a. CCE LTER Contribution #0075.
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Ohman, M. D., Durbin, E. G., Runge, J. A., Sullivan, B. K., and Field, D. B., Relationship of predation potential to mortality of Calanus finmarchicus on Georges Bank, Northwest Atlantic. Limnology and Oceanography, 53 (4), 1643-1655, 2008. CCE LTER Contribution #0074.
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Davis, R. E., M.D. Ohman, B. Hodges, D.L. Rudnick, and J.T. Sherman, Glider surveillance of physics and biology in the southern California Current System. Limnology and Oceanography, 53 (5, part 2), 2151-2168, 2008. CCE LTER Contribution #0073.
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Ohman, M. D., and Hsieh, C. -H., Spatial differences in mortality of Calanus pacificus within the California Current System. Journal of Plankton Research, 30, 359-366, 2008. CCE LTER Contribution #0072.
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Hsieh, C. -H., Anderson, C., and Sugihara, G., Extending nonlinear analysis to short ecological time series. American Naturalist, 171 (1), 71-80, 2008. DOI 10.1086/524202. CCE LTER Contribution #0070.
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Landry, M. R., Decima, M., Simmons, M. P., Hannides, C. C. S., and Daniels, E., Mesozooplankton biomass and grazing responses to Cyclone Opal, a subtropical mesoscale eddy. Deep-Sea Research Part II, 55 (10), 1378-1388, 2008. DOI 10.1016/j.dsr2.2008.01.005. CCE LTER Contribution #0069.
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Landry, M. R., Brown, S. L., Rii, Y. M., Selph, K. E., Bidigare, R. R., Yang, E. J., and Simmons, M. P., Depth-stratified phytoplankton dynamics in Cyclone Opal, a subtropical mesoscale eddy. Deep-Sea Research Part II, 55 (10), 1348-1359, 2008. DOI 10.1016/j.dsr2.2008.02.001. CCE LTER Contribution #0068.
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McClatchie, S, Goericke, R, Auad, G, and Hill, K, Re-assessment of the stock-recruit and temperature-recruit relationships for Pacific sardine (Sardinops sagax). Canadian Journal of Fisheries and Aquatic Sciences, 67, 1782-1790, 2010. DOI 10.1139/F10-101. CCE LTER Contribution #0067.
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Benitez-Nelson, C. R., Bidigare, R. R., Dickey, T. D., Landry, M. R., Leonard, C. L., Brown, S. L., Nencioli, F., Rii, Y. M., Maiti, K., Becker, J. W., Bibby, T. S., Black, W., Cai, W. -J., Carlson, C. A., Chen, F., Kuwahara, V. S., Mahaffey, C., McAndrew, P. M., Quay, P. D., Rappé, M. S., Selph, K. E., Simmons, M. P., and Yang, E. J., Mesoscale eddies drive increased silica export in the subtropical Pacific Ocean. Science, 316 (5827), 1017-1021, 2007. DOI 10.1126/science.1136221. CCE LTER Contribution #0066.
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Kim, H. -J., Miller, A. J., McGowan, J., and Carter, M., Coastal phytoplankton blooms in the Southern California Bight. Progress in Oceanography, 82, 137-147, 2009. DOI 10.1016/j.pocean.2009.05.002. CCE LTER Contribution #0064.
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Chekalyuk, A., and Hafez, M., Advanced laser fluorometry of natural aquatic environments. Limnology and Oceanography: Methods, 6, 591-609, 2008. CCE LTER Contribution #0063.
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Kahru, M., and Mitchell, B. G., Ocean color reveals increased blooms in various parts of the World. EOS, Trans. AGU, 89 (18), p. 170, 2008. CCE LTER Contribution #0062.
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Baker, K. S., and Chandler, C., Enabling long-term oceanographic research: Changing data practices, information management strategies and informatics. Deep-Sea Research II: Special Series Palmer Long-Term Ecological Research, 55 (18-19), 2132-2142, 2008. DOI 10.1016/j.dsr2.2008.05.009. CCE LTER Contribution #0059.
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Booth, J. A., Ruhl, H. A., Lovell, L., Bailey, D. M., and Smith, Jr., K. L., Size-frequency dynamics of NE Pacific abyssal ophiuroids (Echinodermata: Ophiuroidea). Marine Biology, 154 (6), 933-941, 2008. DOI 10.1007/s00227-008-0982-3. CCE LTER Contribution #0058.
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Smith, Jr., K. L., Ruhl, H. A., Kaufmann, R. S., and Kahru, M., Tracing abyssal food supply back to upper-ocean processes over a 17-year time series in the NE Pacific. Limnology and Oceanography, 53, 2655-2667, 2008. CCE LTER Contribution #0057.
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Ruhl, H. A., Ellena, J. A., and Smith, Jr., K. L., Connections between climate, food limitation, and carbon cycling in abyssal sediment communities: a long time-series perspective. Proceedings of the National Academy of Sciences USA, 105, 17006-17011, 2008. DOI 10.1073/pnas.0803898105. CCE LTER Contribution #0056.
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King, A.L., and Barbeau, K.A., Dissolved iron and macronutrient distributions in the southern California Current System. Journal of Geophysical Research, 116 (C3), C03018, 2011. CCE LTER Contribution #0055.
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Bograd, S. J., Castro, C. G., Di Lorenzo, E., Palacios, D. M., Bailey, H., Gilly, W., and Chavez, F. P., Oxygen declines and the shoaling of the hypoxic boundary in the California Current. Geophysical Research Letters, 35, L12607, 2008. DOI 10.1029/2008gl034185. CCE LTER Contribution #0054.
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Mantyla, A. W., Bograd, S. J., and Venrick, E. L., Patterns and controls of chlorophyll-a and primary production cycles in the Southern California Bight. Journal of Marine Systems, 73 (1), 48-60, 2008. DOI 10.1016/j.marsys.2007.08.001. CCE LTER Contribution #0053.
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Peña, M. A., and Bograd, S. J., Time series of the Northeast Pacific. Progress in Oceanography, 75 (2), 115-119, 2007. DOI 10.1016/j.pocean.2007.08.008. CCE LTER Contribution #0052.
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Rykaczewski, R. R. and Checkley Jr., D. M., Influence of ocean winds on the pelagic ecosystem in upwelling regions. Proceedings of the National Academy of Sciences, 105 (6), 1965-1970 (+ 3 figs), 2008. CCE LTER Contribution #0051.
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Kahru, M, Fiedler, P C., Gille, S T., Manzano, M, and Mitchell, B G., Sea level anomalies control phytoplankton biomass in the Costa Rica Dome area. Geophysical Research Letters, 34, L22601, 2007. DOI 10.1029/2007gl031631. CCE LTER Contribution #0050.
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Millerand, F., and Baker, K. S., Who are the users? From a single user to a web of users in the design of a working standard. Information Systems Journal, 20, 137-161, 2010. DOI 10.1111/j.1365-2575.2009.00338.x. CCE LTER Contribution #0049.
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Danioux, E., Klein, P., Rivière, P., Propagation of wind energy into the deep ocean through a fully turbulent mesoscale eddy field. Journal of Physical Oceanography, 38, 2224-2241, 2008. DOI 10.1175/2008jpo3821.1. CCE LTER Contribution #0048.
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Hopkinson, B. M., and Barbeau, K., Influence of iron on phytoplankton in subsurface chlorophyll maximum communities of the eastern Pacific. Limnology and Oceanography, 53 (4), 1303-1318, 2008. CCE LTER Contribution #0047.
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Lavaniegos, B. E., and Ohman, M. D., Coherence of long-term variations of zooplankton in two sectors of the California Current System. Progress in Oceanography, 75 (1), 42-69 (+ electronic supplement), 2007. DOI 10.1016/j.pocean.2007.07.002. CCE LTER Contribution #0046.
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Roth, J. E., Mills, K. L., and Sydeman, W. J., Chinook salmon (Oncorhynchus tshawytscha) – seabird covariation off central California and possible forecasting applications. Canadian Journal of Fisheries and Aquatic Sciences, 64, 1080-1090, 2007. CCE LTER Contribution #0045.
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Kim, H. -J., and Miller, A. J., Did the thermocline deepen in the southern California Current after the 1976-77 climate regime shift?. Journal of Physical Oceanography, 37, 1733-1739, 2007. CCE LTER Contribution #0044.
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Di Lorenzo, E., Schneider, N., Cobb, K. M., Chhak, K., Franks, P. J., Miller, J. C. McWilliams, A. J., Bograd, S. J., Arango, H., Curchister, E., Powell, T. M., and Rivière, P., North Pacific Gyre Oscillation links ocean climate and ecosystem change. Geophysical Research Letters, 2008. DOI 10.1029/2007gl032838. CCE LTER Contribution #0043.
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Hsieh, C. -H., Reiss, C. S.., Hewitt, R. P., and Sugihara, G., Spatial analysis shows fishing enhances the climatic sensitivity of marine fishes. Canadian Journal of Fisheries and Aquatic Sciences, 65, 947-961, 2008. CCE LTER Contribution #0042.
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Peterson, B., Emmett, R., Goericke, R., Venrick, E., Mantyla, A., Bograd, S. J., Schwing, F. B., Hewitt, R., Lo, N., Watson, W., Barlow, J., Lowry, M., Ralston, S., Forney, K. A., Lavaniegos, B. E., Sydeman, W. J., Hyrenbach, D., Bradley, R. W., Warzybok, P., Chavez, F., Hunter, K., Benson, S., Weise, M., Harvey, J., Gaxiola-Castro, G., and Durazo, R., The State of the California Current, 2005-2006: Warm in the North, Cool in the South. CalCOFI Reports, 47, 30-74, 2006. CCE LTER Contribution #0041.
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Ruhl, H. A., Community change in the variable resource habitat of the abyssal NE Pacific. Ecology, 89 (4), 991-1000, 2008. CCE LTER Contribution #0040.
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Vardaro, M. F., Parmley, D., and Smith Jr., K. L., A study of possible "reef effects" caused by a long-term time lapse camera in the deep North Pacific. Deep-Sea Research I, 54, 1231-1240, 2007. CCE LTER Contribution #0039.
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Ruhl, H. A., Abundance and size distribution dynamics of abyssal epibenthic megafauna in the Northeast Pacific. Ecology, 88 (3), 1250-1262, 2007. CCE LTER Contribution #0038.
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Bailey, D. M., Ruhl, H. A., and Smith, K. L., Long-term change in benthopelagic fish abundance in the abyssal Northeast Pacific Ocean. Ecology, 87 (3), 549-555, 2006. CCE LTER Contribution #0037.
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King, A. L., and Barbeau, K., Evidence for phytoplankton iron limitation in the southern California Current System. Marine Ecology Progress Series, 342, 91-103, 2007. CCE LTER Contribution #0035.
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Chhak, K., and Di Lorenzo, E., Decadal variations in the California Current upwelling cells. Geophysical Research Letters, 34, L14604, 2007. CCE LTER Contribution #0034.
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Mackas, D. L., Peterson, W. T., Ohman, M. D., and Lavaniegos, B. E., Zooplankton anomalies in the California Current system before and during the warm ocean conditions of 2005. Geophysical Research Letters, 33, L22S07, 2006. CCE LTER Contribution #0030.
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Aksnes, D. L., Ohman, M., and Rivière, P., Optical effect on the nitracline in a coastal upwelling area. Limnology and Oceanography, 52 (3), 1179-1187, 2007. DOI 10.4319/lo.2007.52.3.1179. CCE LTER Contribution #0029.
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Rivière, P., and Pondaven, P., Phytoplankton competitions in frontal oceanic regions. Journal of Marine Systems, 60, 345-364, 2006. CCE LTER Contribution #0028.
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Rintoul, C. R., Langabeer-Schlagenhauf, B., Morgan, K. H., Hyrenbach, K. D., and Sydeman, W. J., Atlas of California Current Marine Bird and Mammal Distributions, Version 1. PRBO Technical Report, 2006. CCE LTER Contribution #0027.
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Baker, K. S., and Bowker, G. C., Information Ecology: Open System Environment for Data, Memories, and Knowing. Journal of Intelligent Information Systems. BDEI Special Series, 29, 127-144, 2007. CCE LTER Contribution #0024.
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Hsieh, C. -H., Reiss, C. S.., Hunter, J. R.., Beddington, J. R.., May, R. M., and Sugihara, G., Fishing elevates variability in the abundance of exploited species. Nature, 443 (7113), 859-862, 2006. CCE LTER Contribution #0023.
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Aksnes, Dag L., Evidence for visual constraints in large marine fish stocks. Limnology and Oceanography, 52 (1), 198-203, 2007. CCE LTER Contribution #0021.
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Sydeman, W J., Bradley, R W., Warzybok, P, Abraham, C L., Jahncke, J, Hyrenbach, K D., Kousky, V, Hipfner, J M., and Ohman, Mark D., Planktivorous Auklet Ptychoramphus aleuticus Responses to Ocean Climate, 2005: Unusual Atmospheric Blocking?. Geophysical Research Letters, 33 (22), L22S09, 2006. CCE LTER Contribution #0019.
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Yen, P P. W., Sydeman, W J., Bograd, S J., and Hyrenbach, K D., Spring-time distributions of migratory marine birds in the southern California Current: Oceanic eddy associations and coastal habitat hotspots over 17 years. Deep-Sea Research, Part II, 53 (3-4), 399, 2006. CCE LTER Contribution #0018.
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Karasti, H., Baker, K. S., and Halkola, E., Enriching the Notion of Data Curation in e-Science: Data Managing and Information Infrastructuring in the Long Term Ecological Research (LTER) Network. Journal of Computer Supported Cooperative Work: An International Journal, 15 (4), 321-358, 2006. CCE LTER Contribution #0013.
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Goericke, R., E. Venrick, T. Koslow,, A. Mantyla, S.J, Bograd, F.B. Schwing, A. Huyer, R.L. Smith, P.A. Wheeler, R.Hooff, W.T. Peterson, F. Chavez, C. Collins, B. Marinovic, N. Lo, G. Gaxioloa-Castro, R. Durazo, K.D. Hyrenbach, and Sydeman, W.J., The State of the California Current, 2004-2005: Still cool?. CalCOFI Reports, 46, 32-71, 2005. CCE LTER Contribution #0012.
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Hsieh, C. -H., and Ohman, M. D., Biological responses to environmental forcing: The Linear Tracking Window hypothesis. Ecology, 87 (8), 1932-1938, 2006. CCE LTER Contribution #0010.
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Hereu, C M., Lavaniegos, B E., Gaxiola-Castro, G, and Ohman, M D., Composition and potential grazing impact of salp assemblages off Baja California during the 1997-1999 El Niño and La Niña. Marine Ecology Progress Series, 318, 123-140, 2006. CCE LTER Contribution #0009.
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Field, D B., Baumgartner, T R., Charles, C D., Ferreira-Bartrina, V, and Ohman, M D., Planktonic foraminifera of the California Current reflect twentieth century warming. Science, 311 (5757), 63-66, 2006. CCE LTER Contribution #0008.
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Di Lorenzo, E., Miller, A. J., Schneider, N., and McWilliams, J. C., The warming of the California Current: dynamics and ecosystem implications. Journal of Physical Oceanography, 35 (3), 336-362, 2005. CCE LTER Contribution #0007.
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Bograd, S J., and Mantyla, A W., On the subduction of upwelled waters in the California Current. Journal of Marine Research, 63 (5), 863-885, 2005. CCE LTER Contribution #0006.
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Smith, Jr., K L., Baldwin, R J., Ruhl, H A., Kahru, M, Mitchell, B G., and Kaufmann, R S., Climate effect on food supply to depths greater than 4,000 meters in the northeast Pacific. Limnology and Oceanography, 50 (1), 166-176, 2006. CCE LTER Contribution #0005.
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Hsieh, C. -H., Glaser, S. M., Lucas, A. J., and Sugihara, G., Distinguishing random environmental fluctuations from ecological catastrophes for the North Pacific Ocean. Nature, 435 (7040), 336, 2005. CCE LTER Contribution #0004.
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Hsieh, C. -H., Reiss, C., Watson, W., Allen, M. J., Hunter, J. R., Lea, R. N., Rosenblatt, R., Smith, P. E., and Sugihara, G., A comparison of long-term trends and variability in populations of larvae of exploited and unexploited fishes in the Southern California region: a community approach. Progress in Oceanography, 67 (1-2), 160-185, 2005. CCE LTER Contribution #0001.
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Edited Books

Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, 378 pp., U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0260.
Website

Sea Secrets: Tiny Clues to a Big Mystery, 32 pp., Moonlight Publishing, Layfayette, CO, 2008. CCE LTER Contribution #0065.

Book Sections

Ohman, M.D., Prologue to: Sardet, C. Plankton: Wonders of the Drifting World, pp. 224, University of Chicago Press, Chicago, IL, 2015. CCE LTER Contribution #0318; AR2015.

Peters, D. P. C., Laney, C. M., Lugo, A. E., Collins, S. L., Driscoll, C. T., Groffman, P. M., Grove, J. M., Knapp, A. K., Kratz, T. K., Ohman, M. D., Waide, R. B., and Yao, J., Long-term trends in precipitation and surface water chemistry in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 115-161, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0266.
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Peters, D. P. C., Laney, C. M., Lugo, A. E., Collins, S. L., Driscoll, C. T., Groffman, P. M., Grove, J. M., Knapp, A. K., Kratz, T. K., Ohman, M. D., Waide, R. B., and Yao, J., Long-term trends in production, abundance, and richness of plants and animals in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 191-205, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0265.
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Peters, D. P. C., Laney, C. M., Lugo, A. E., Collins, S. L., Driscoll, C. T., Groffman, P. M., Grove, J. M., Knapp, A. K., Kratz, T. K., Ohman, M. D., Waide, R. B., and Yao, J., Long-term trends in human demography and economy across sites in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 162-190, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0264.
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Peters, D. P. C., Laney, C. M., Lugo, A. E., Collins, S. L., Driscoll, C. T., Groffman, P. M., Grove, J. M., Knapp, A. K., Kratz, T. K., Ohman, M. D., Waide, R. B., and Yao, J., Long-term trends in climate and climate-related drivers in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 81-114, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0263.
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Peters, D. P. C., Laney, C. M., Lugo, A. E., Collins, S. L., Driscoll, C. T., Groffman, P. M., Grove, J. M., Knapp, A. K., Kratz, T. K., Ohman, M. D., Waide, R. B., and Yao, J., Long-term trends in ecological systems: an introduction to cross-site comparisons and relevance to global change studies in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 1-20, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0262.
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Peters, D. P. C., Fraser, W. R., Kratz, T. K., Ohman, M. D., Rassweiler, A., Holbrook, S. J., and Schmitt, R. J., Cross-site comparisons of state-change dynamics in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A. K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 36-41, U.S. Department of Agriculture, Washington,D.C., 2013. CCE LTER Contribution #0261.
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Ohman, M. D., and Kratz, T. K., Cross-site comparisons of ecological responses to climate and climate-related drivers in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A.E., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A.K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 28-35, U.S. Department of Agriculture, Washington, D.C., 2013. CCE LTER Contribution #0200.
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Harris, R.P., Buckley, L.J., Campbell, R.G., Chiba, S., Costa, D.P., Dickey, T.D., Irigoien, X., Kiorboe, T., Mollmann, C., Ohman, M.D., Runge, J. A., Saiz, E., and Wiebe, P.H., Dynamics of marine ecosystems: observation and experimentation in Marine Ecosystems and Global Change, edited by Barange, M., Field, J.G., Harris, R.P., Hofmann, E.E., Perry, R.I., and Werner, F., pp. 129-178, Oxford University Press, Inc., New York, Oxford, 2010. CCE LTER Contribution #0174.
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Bograd, S. J., Sydeman, W. J., Barlow, J., Booth, A., Brodeur, R.D., Calambokidis, J., Chavez, F., Crawford, W. R., Di Lorenzo, E., Durazo, R., Emmett, R., Field, J., Gaxiola-Castro, G, Gilly, W., Goericke, R, Hildebrand, J., Irvine, J.E., Kahru, M, Koslow, J. A., Lavaniegos, B. E., Lowry, M., Mackas, D. L., Manzano-Sarabia, M., McKinnell, S.M., Mitchell, B G., Munger, L., Perry, R.I., Peterson, W.T., Ralston, S., Schweigert, J., Suntsov, A., Tanasichuk, R., Thomas, A. C., and Whitney, F.A., Status and trends of the California Current region, 2003-2008 in Marine Ecosystems of the North Pacific Ocean 2003-2008; PICES Special Publication 4, edited by McKinnell, S.M. and Dagg, M.J., pp. 393; pgs 106-141, 2010. CCE LTER Contribution #0153.
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Laney, C. M., Baker, K. S., Peters, D. P. C., and Ramsey, K. W., Recommendations for Data Accessibility in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, .AE., Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A.K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 216-225, U.S. Department of Agriculture, Washington, D.C., 2013. CCE LTER Contribution #0149.
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Laney, C. M., Peters, D. P. C., Baker, K. S., and Ramsey, K. W., History and Organization of the EcoTrends Project in Long-Term Trends in Ecological Systems: A Basis for Understanding Responses to Global Change, edited by Peters, D.P.C., Laney, C.M., Lugo, A..E, Collins, S.L., Driscoll, C.T., Groffman, P.M., Grove, J.M., Knapp, A.K., Kratz, T.K., Ohman, M.D., Waide, R.B., and Yao, J., pp. 21-27, U.S. Department of Agriculture, Washington, D.C., 2013. CCE LTER Contribution #0148.
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Baker, K. S., and Millerand, F., Infrastructuring ecology: challenges in achieving data sharing in Collaboration in the New Life Sciences, edited by Parker, J., Vermeulen, N., and Penders, B., Ashgate Publishing, Surrey, England, 2010. CCE LTER Contribution #0147.
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Landry, M. R., Grazing processes and secondary production in the Arabian Sea: A simple food web synthesis with measurement constraints in Indian Ocean Biogeochemical Processes and Ecological Variability, edited by Wiggert, J.D., R. R. Hood, S. W. A. Naqvi, K. H. Brink, and S. L. Smith, pp. pp. 133 - 146, AGU, Washington, D. C., 2009. DOI 10.1029/2008GM000781. CCE LTER Contribution #0111.

May, R. M., Crawley, M., and Sugihara, G., Patterns in Multispecies Communities in Theoretical Ecology, edited by May, R. M., and McLean, A., Oxford University Press, 2007. CCE LTER Contribution #0071.

Bowker, G., Baker, K. S., Millerand, F., and Ribes, D., Towards Information Infrastructure Studies: Ways of Knowing in a Networked Environment in International Handbook of Internet Research, edited by Hunsinger, J., Klasrup, L., and Allen, M., pp. 97-117, New York, Springer, 2010. DOI 10.1007/978-1-4020-9789-8_5. CCE LTER Contribution #0060.
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Millerand, F., and Bowker, G. C., Metadata Standard: Trajectories and Enactment in the Life of an Ontology in Formalizing Practices: Reckoning with Standards, Numbers and Models in Science and Everyday Life, edited by Lampland, M., and Star, S. L., Cornell University Press, 2009. CCE LTER Contribution #0036.

Sala, E, and Sugihara, G, Food-web theory provides guidelines for marine conservation in Food Webs: An Ecosystem Approach, edited by Belgrano, A., pp. 170-183, Oxford University Press, Oxford, 2005. CCE LTER Contribution #0002.

Reports

Sydeman, W J., D. Breese and M. Losekoot, Seabirds on the CalCOFI/CCE-LTER Surveys, 2012: Annual Data Report in FIAER Annual Data Report, pp. 16, FIAER, Petaluma, CA, 2013. CCE LTER Contribution #0274.
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Kadir, T., L. Mazur, C. Milanes, and K. Randles, Indicators of climate change in California, pp. 258, California Environmental Protection Agency and Office of Environmental Health Hazard Assessment, 2013. CCE LTER Contribution #0272.

Zamon, J.E., T.P. Good and W.J. Sydeman, Ecosystem components, protected species - Seabirds in NOAA Technical Report, pp. 1-40, U.S. Dept. of Commerce, 2012. CCE LTER Contribution #0271.

Baker, K. S., Kortz, M., and Conners, J., DataZoo: an Oceanographic Information System Supporting Scientific Research in SIO Technical Report Series, pp. 101 pgs, Scripps Institution of Oceanography, UC San Diego, La Jolla, 2011. CCE LTER Contribution #0177.
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Nur, N., Jahncke, J., Howar, J., Herzog, M., and Wiens, J., Using seabirds to identify marine hotspots in the California Current System in PRBO Unpublished Report, Point Reyes Bird Observatory, Petaluma, CA, 2010. CCE LTER Contribution #0158.
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Baker, K. S., Informatics and the Environmental Sciences in SIO Technical Report Series, Scripps Institution of Oceanography, UC San Diego, 2005. CCE LTER Contribution #0155.
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Overview of CCE LTER Ecological Research Site (Mid-term Site Review), SIO, La Jolla, 2007. CCE LTER Contribution #0122.
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Executive Summary of the CCE LTER (Mid-term Site Review), SIO, La Jolla, 2007. CCE LTER Contribution #0121.
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LTER Science Council Meeting and Field Trip, SIO, La Jolla, 2009. CCE LTER Contribution #0120.
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Simmons, B. E., Psst....We have a secret....and we would like to share it! in The SWMEA Connection, 2008. CCE LTER Contribution #0104.
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Simmons, B. E., Unlocking the Clues of "Sea Secrets" in LTER Network News, Univ. of New Mexico, Albuquerque, 2008. CCE LTER Contribution #0103.

Baker, K. S., and Ohman, M. D., CCE Holds First Annual Meeting in LTER Network News, Univ. of New Mexico, 2006. CCE LTER Contribution #0022.
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Simmons, B., Program Survey and Assessment, Chapter 6 in Schoolyard LTER Education Handbook, 2005. CCE LTER Contribution #0003.
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Theses

Hogle, S., Indicators of Iron Metabolism in Marine Microbial Genomes and Ecosystems, Ph.D. thesis, University of California, San Diego, CA, 2016. CCE LTER Contribution #0373; AR2016.

Netburn, A.N., Responses of mesopelagic fish assemblages to environmental disturbance: ocean deoxygenation and oceanic fronts., Ph.D. thesis, University of California, San Diego, CA, 2016. CCE LTER Contribution #0356; AR2016.

de Verneil, A., Phytoplankton in Surface Ocean Fronts: Resolving Biological Dynamics and Spatial Structure, Ph.D. thesis, University of California, San Diego, 2015. CCE LTER Contribution #0341; AR2016.

Bresnahan, P.J., Novel Marine Inorganic Carbon Sensors for the Anthropocene, Ph.D. thesis, University of California, San Diego, 2015. CCE LTER Contribution #0338; AR2016.

Bundy, R. M., Iron and copper organic complexation in marine systems: Detection of multiple ligand classes via electrochemistry, PhD. thesis, University of California, San Diego, 2014. CCE LTER Contribution #0308; AR2015.

Pedler Sherwood, B., Bacterial Alteration and Removal of Dissolved Organic Matter in the Surface Ocean, Ph.D. thesis, University of California, San Diego, 2014. CCE LTER Contribution #0305; AR2015.

Taylor, A.G., Biomass structure and environmental relationships for phytoplankton communities in the southern California Current and adjacent ocean ecosystems, Ph.D. thesis, University of California, San Diego, 2014. CCE LTER Contribution #0283; AR2014.
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Pasulka, A. L., Marine Protists: Distributions, Diversity and Dynamics, Ph.D. thesis, University of California, San Diego, 2013. CCE LTER Contribution #0282.

Asch, R. G., Interannual-to-Decadal Changes in Phytoplankton Phenology, Fish Spawning Habitat, and Larval Fish Phenology, Ph.D. thesis, University of California, San Diego, 2013. CCE LTER Contribution #0275.
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Powell, J. R., Ocean fronts in the Southern California Current System and their role in structuring zooplankton distributions, diel vertical migration, and size composition, Ph.D. thesis, University of California, San Diego, 2013. CCE LTER Contribution #0258.
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Samo, Ty James, Microscale habitats and activities of bacteria and their ecological and biogeochemical significance in the ocean, Ph.D. thesis, University of California, San Diego, 2012. CCE LTER Contribution #0252.
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Taniguchi, D.A.A., Size structuring of planktonic communities: Biological rates and ecosystem dynamics, Ph.D. thesis, University of California, San Diego, 2012. CCE LTER Contribution #0227.
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Cawood, A. M., Laboratory and In Situ Investigations of Factors Affecting the Growth and Survivorship of the Scyphozoan Jellyfish Aurelia sp1, Ph.D. thesis, University of California, San Diego, 2012. CCE LTER Contribution #0226.
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Goldstein, M. C., Abundance and ecological implications of microplastic debris in the North Pacific Subtropical Gyre, Ph.D. thesis, University of California, San Diego, 2012. CCE LTER Contribution #0225.
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Décima, M., Mesozooplankton trophic variability in a changing ocean, Ph.D. thesis, University of California, San Diego, 2011. CCE LTER Contribution #0203.
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Davison, P. C., The Export of Carbon Mediated by Mesopelagic Fishes in the Northeast Pacific Ocean, Ph.D. thesis, University of California, San Diego, 2011. CCE LTER Contribution #0202.
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Song, H., Sensitivity analysis, ocean state estimation and diagnostics in the California Current, Ph.D. thesis, University of California, San Diego, 2011. CCE LTER Contribution #0175.
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Stukel, M. R., Biological control of vertical carbon flux in the California Current and Equatorial Pacific, Ph.D. thesis, University of California, San Diego, 2011. CCE LTER Contribution #0166.
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Tai, V., Diversity and dynamics of synechococcus populations in the southern California bight, Ph.D. thesis, University of California, San Diego, San Diego, 2009. CCE LTER Contribution #0162.
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Karakoylu, Erdem M., The foraging sorties hypothesis: Evaluating the effect of gut dynamics on copepod foraging behavior, Ph.D. thesis, University of California, San Diego, 2010. CCE LTER Contribution #0157.
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Hull, P. M., Macroevolutionary patterns in planktonic foraminifera and the recovery of pelagic ecosystems from the Cretaceous-Paleogene mass extinction, Ph.D. thesis, University of California, San Diego, 2010. CCE LTER Contribution #0156.
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Swart, N. C., Lateral carbon transport from the southern Benguela, M.S. thesis, University of Cape Town, South Africa, Cape Town, 2008. CCE LTER Contribution #0140.

Soldevilla, M. S., Risso's and Pacific white-sided dolphins in the Southern California Bight: using echolocation clicks to study dolphin ecology, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0119.
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Glaser, S. M., Foraging ecology of North Pacific albacore in the California Current System, Ph.D. thesis, University of California, San Diego, 2009. CCE LTER Contribution #0118.
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Hansman, R., Microbial metabolism in the deep ocean, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0117.
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Rykaczewski, R. R., Influence of Oceanographic Variability on the Planktonic Prey and Growth of Sardine and Anchovy in the California Current Ecosystem, Ph.D. thesis, University of California, San Diego, 2009. CCE LTER Contribution #0116.
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Dupont, C., Physiological, ecological, and evolutionary studies of trace metal homeostasis in marine microbes, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0115.
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Vardaro, M. F., Deep-sea Bioturbation and the Role of the Sea Urchin Echinocrepis rostrata, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0091.
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de Jesus, R., Natural Abundance Radiocarbon Studies of Dissolved Organic Carbon (DOC) in the Marine Environment, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0084.
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King, A. L., Iron distribution and phytoplankton iron limitation in the southern California Current System, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0080.
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Kim, H. -J., Physical-biological climate changes in the Southern California Bight, Ph.D. thesis, University of California, San Diego, 2008. CCE LTER Contribution #0079.
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Hopkinson, B. M., Oceanographic and ecological consequences of iron localization in phytoplankton photosystems, Ph.D. thesis, University of California, San Diego, 2007. CCE LTER Contribution #0078.
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Romagnan, J. -B., Vertical habitat shift of mesozooplankton assemblages in the California Current, M.S. thesis, Universite Pierre et Marie Curie, Paris, 2007. CCE LTER Contribution #0031.

Ruhl, H A., Climate and food supply influences on mobile epibenthic megafauna populations in the abyssal NE Pacific from 1989 to 2004, Ph.D. thesis, University of California, San Diego, 2006. CCE LTER Contribution #0017.
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Hsieh, C. -H., Separating environmental effects from fishing impacts on the dynamics of fish populations of the Southern California region, Ph.D. thesis, University of California, San Diego, 2006. CCE LTER Contribution #0016.
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Conference Proceedings

Ellen, J., H. Li, and M.D. Ohman, Quantifying California Current Plankton Samples with Efficient Machine Learning Techniques in Proceedings of OCEANS'15 MTS/IEEE, Washington, D.C., 2015. CCE LTER Contribution #0344; AR2016.
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Karasti, H., and Baker, K. S., Community Design - Growing One's Own Information Infrastructure in Proceedings of the Participatory Design Conference, Bloomington, IN, 2008. CCE LTER Contribution #0061.
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Baker, K. S., and Millerand, F., Scientific Information Infrastructure Design: Information Environments and Knowledge Provinces in Proceedings of the American Society for Information Science and Technology ASIST 2007, pp. 1-6, Milwaukee, WI, 2007. CCE LTER Contribution #0033.
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Ribes, D., and Baker, K. S., Modes of Social Science Engagement in Community Infrastructure Design in Proceedings of the Third International Conference on Communities and Technologies, pp. 107-130, Springer, Michigan State University, 2007. CCE LTER Contribution #0032.
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Baker, K. S., and Millerand, F., Articulation Work Supporting Information Infrastructure Design: Coordination, Categorization, and Assessment in Practice in Proceedings of the 40th Hawaii International Conference on Science Systems, HICSS40, IEEE Computer Society, Big Island, Hawaii, 2007. CCE LTER Contribution #0026.
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Baker, K. S., and Stocks, K. I., Building Environmental Information Systems: Myths and Interdisciplinary Lessons in Proceedings of the 40th Hawaii International Conference on System Sciences, HICSS40, IEEE Computer Society, Big Island, Hawaii, 2007. CCE LTER Contribution #0025.
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Ribes, D., and Baker, K. S., Elements of Social Science Engagement in Information Infrastructure Design in Proceedings of the Seventh Annual International Conference on Digital Government Research, pp. 450, San Diego, CA, 2006. CCE LTER Contribution #0020.
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Ribes, D., Baker, K. S., Millerand, F., and Bowker, G. C., Comparative Interoperability Project: Configurations of Community, Technology, Organization in Proceedings of the second ACM/IEEE-CS Joint Conference on Digital Libraries, Academic Press, New York, 2005. CCE LTER Contribution #0015.
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Baker, K. S., Ribes, D., Millerand, F., and Bowker, G. C., Interoperability Strategies for Scientific Cyberinfrastructure: Research and Practice in Proceedings of the American Society for Information Systems and Technology, 2005. CCE LTER Contribution #0014.
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Baker, K. S., Jackson, S. J., and Wanetick, J. R., Strategies Supporting Heterogeneous Data and Interdisciplinary Collaboration: Towards an Ocean Informatics Environment in 38th Hawaii International Conference on System Science, HICSS38, IEEE Computer Society, Big Island, Hawaii, 2005. CCE LTER Contribution #0011.
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Magazine Articles

Ramirez, C., , 2015I was a terrified teacher at sea. California Educator, 19 (8), 12-13 CCE LTER Contribution #0319; AR2015.
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